Syngnathus scovelli (Gulf pipefish): 125979904
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Entry
125979904 CDS
T08785
Name
(RefSeq) astrotactin-2 isoform X1
KO
K24479
astrotactin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125979904
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125979904
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
ASTN1_2_fn3
Annexin_2
ASTN_2_hairpin
FXa_inhibition
MACPF
GRP
Motif
Other DBs
NCBI-GeneID:
125979904
NCBI-ProteinID:
XP_049594712
LinkDB
All DBs
Position
13:complement(8295264..8445669)
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AA seq
1353 aa
AA seq
DB search
MASTAPLLLLFRLLLLELTPITASATDEGTPGGEGHAAGTPCEIKSVTVSTLPVLRENEF
SFTGVGAYGSSVGGGGDGVGASAGVGGTAGGGPGGGGGDSRLLLFVRTDLPGRISVMDDL
DNTALPYFALEMSGRGEDISKVHWKQQWLENGTLYFHVSLMESEAVAQTTQASAREPVHI
MHEHMHLLHISVMGGLIALLLLILLFTLVLYTRHRWCKRRRVPQKSASTEATHEIHYIPS
VLLGPQGRDSYRGSRSTHQHGGSVIGVPIRETPILDDYDCDDDDPVVRSLNSTPNQLHKK
VSDGTIQDDYGVGIGYGGHTDTKEDELTHSFDKRAIDPNREAVEDLMQRFQDSFRVPKTP
PDISRYQHVIHSSSTSRRRVPSHNRATAGMFGPQGESGSEPEDDNKFYTEQHRGRRRSKG
HPHSPLNKVTLTLITISTCVVAIVYATQDSCPLTVKVTLHVPEHFVADGSSFVMAMGSFL
DVSNWLNPAKLILYYQTNSSTHWVRDYCGQRTTDPCEQICDQDTGECSCHDGYSPDLVHK
HLCVRSDWGQNEGPWPYANLEKGYDLVTGEQAPERIFRSLYSLGQGLWLPVSKSFVVPPV
ELSINPIASCKTDVLVTEDPGEVRDEAMMSTYFETVEDLLVSFGPVRDCSKDNGGCKKNF
KCVSDRQMDSSGCMCPSGLRPMKDGSGCYDYSRGIDCTDGFNGGCEQLCHQQLVPLQDEP
GSSNVLMYCGCVQEYKLAADGRSCLLQSENCEGPKCPRQTVHFNVTLFGEMLHGYDNKSQ
QVNLGQIFQMTFRDNNFVKDFPQLADGLMVLPLPVEEQCRGVLSEPLPNQDLLTGVAKFN
EAAGYPMIQQWRVRSNLYKVKLSSITLASGFAKVLKTLSGESTREELLAFLRQYGSHYVS
EALYGSELSCSIYFPSKKAQQQLWLQYQKEATEQGLGGAGGHHELKSVPFISYLMALQKS
QLLSDDAVNGVEIRCEEKGSCPLSCHLCHHQAAVAGGVVARGRGRGGEQPSPIPVLLEVS
RVVPLYSLVQDNMTKEAFKSATMSSYWCAGKGDVIDNWCRCDLSAFSRDGLPNCSPLRQP
VLHLAPYLEPSSTMVALEWLDVEPLIGCKVSDYIIQHKRVEDPSEAEVYTGEVLSLLDDL
LSGLGSSCVVPGKRSGEHPHTLLYSVVFKCLEPDSLYKFTLYAVDSRGSHSDSSYVSVRT
SCPMVDDSRAEEIADKVYNLYNGYTSGKEQQLAYNTLMEIPPPLLYRVQHHYNSLYEKFG
DFVWRSEDELGPRKANLILRRVDKISHYCRSLLHSTHIQSRTDTMAYVYCRSDDGRMPAS
EGAWSGSLHEGRTACTEKLISVQRNTYSNTKLR
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccgcgccgttgctgctgctcttccgcctgctcctcctggagctcacgccg
atcaccgcaagtgcaaccgacgaggggacacccggcggagagggacacgcagcggggact
ccgtgcgagatcaagagcgtcaccgtctccacgctgcccgtgttacgggaaaacgagttt
agcttcaccggcgttggagcctacgggagctcggtcggtggaggtggcgatggagtgggc
gcctccgcgggagttgggggcaccgctggaggaggaccgggtggaggaggaggggactcg
cggctcctattattcgtcaggacggatctacctgggcggatttctgtcatggatgatctc
gacaatacggctctgccttacttcgccctcgagatgtcggggaggggggaagacatttcc
aaggttcactggaagcagcagtggctggagaacgggacactttatttccacgtgtccttg
atggaatcggaggcggtggcccagaccacgcaggcctcggcgcgggagccagttcacatc
atgcacgaacacatgcatctgctgcacatctctgttatgggaggcctcatcgccctgctc
ctgctcattctcctcttcaccttggtcctctacacccgccatcgatggtgcaagcgtcgc
agggtcccccagaagagcgccagtacagaggccactcacgaaatccactacatcccctcg
gtactgctgggaccccaaggccgggatagttaccggggctcacggagcacccaccagcac
ggcggctccgtcatcggcgtgcccatccgagagacgcccatcctggacgattatgactgc
gacgatgacgacccggtggttcgctcgctgaactccactcccaaccagctgcacaagaaa
gtgagcgacgggacgatccaggacgactacggagtcggtatcggctacggaggacacaca
gacactaaggaggatgaacttacacattcttttgacaaaagagctattgacccgaacaga
gaggccgtggaagatttgatgcagcggttccaggacagcttccgcgttcctaaaaccccg
ccagacatttcacgctaccaacacgttatccacagctcctctaccagccgccggagagta
cccagccacaacagagcaaccgcaggcatgtttggtcctcaaggagaatcagggtcagag
cccgaggacgacaacaagttttacaccgagcagcacagaggacgacgacgcagcaaaggc
cacccacacagtcctctaaacaaggtcaccctgacgctgattaccatcagcacctgcgtc
gtggccattgtctacgccacgcaggattcctgcccactcactgtcaaggtcacgctccat
gtgcctgagcactttgtcgcagatggaagtagttttgttatggctatgggcagcttcctg
gatgtttccaattggctcaacccagccaagctcatcctgtactatcagactaattcgtcc
acgcactgggtccgagactactgtggccagaggactactgacccctgtgagcagatttgt
gaccaggacacaggagaatgcagctgtcacgacggctattcgccggatcttgtccataaa
cacctctgtgttcgcagtgactggggtcagaatgaagggccttggccgtatgctaacctt
gagaaaggctacgacctggttacgggcgaacaagccccggaaagaattttcagatcactc
tatagtctgggccaaggcttgtggctgcctgtcagcaagagctttgtggtgccgccggtg
gagctgtcaatcaatcctatcgccagctgcaagacagacgtcctggtgaccgaagacccg
ggagaggtcagggatgaagccatgatgtccacatatttcgaaaccgtcgaggacttgctg
gtgtctttcgggcccgtccgtgactgctctaaagataacggcggctgcaagaagaatttc
aagtgtgtgtcggaccgacagatggactcatccggctgcatgtgtcctagcgggctgagg
ccgatgaaagatggctctggttgctatgactactccaggggcatcgactgcacggacggt
tttaacggaggctgtgagcagctgtgtcaccagcagctcgtgcccctccaagacgagccc
gggtccagcaacgtgctcatgtactgcggatgtgtgcaggagtacaaactggcagcagat
ggccgctcgtgcctgctgcagtcagaaaactgcgagggtcccaaatgtccgcggcagacc
gtccacttcaacgtgaccttgtttggcgagatgctgcatggatatgacaacaaaagtcaa
caagtcaacctgggacagatcttccagatgacattccgagataacaacttcgttaaggac
ttcccccagctagccgatggcctcatggttcttcccctgccggttgaagaacaatgcaga
ggtgtgttatcagaaccgctgccaaatcaggatctcctcacaggtgtagcaaagttcaac
gaggccgcgggctatcccatgattcagcagtggcgagtgcgcagcaatctgtacaaagtc
aagctcagttccatcactcttgcttcaggttttgccaaggttctaaagacgctgtcaggc
gagagcacgcgcgaggagcttttggcattcctcaggcaatatggcagccactatgtatcc
gaagcgctgtacggctctgagctcagctgcagcatctacttccccagcaagaaggcccag
cagcagctctggcttcagtaccagaaagaggcaacagaacaagggcttggtggtgctggc
gggcatcatgaactgaaatcggtgcccttcattagctacttgatggctttgcagaagagc
cagctgctgtccgatgatgccgtcaatggcgtggagatccgttgcgaggagaagggcagc
tgcccactcagctgccacctatgccaccaccaagccgcggtggcaggaggtgtggtggcg
agaggccgtggcaggggcggcgaacaaccttcgcccatccctgtcttgttggaagtcagc
cgcgtggtgcctctctatagcttggtccaggacaacatgaccaaagaggccttcaagagc
gccacaatgagctcatactggtgtgccggaaagggcgacgtcattgataactggtgtcgc
tgtgacctgagtgcctttagcagagatggcctgcctaactgcagtcccctcaggcagccg
gtcttacacctcgctccttacctggaaccttcgagcacaatggtagccctggagtggttg
gacgtggagcctctgattggctgcaaagtttcagactacatcattcagcataaacgggtg
gaagacccctctgaggccgaagtctacacaggtgaagtgttgagcttgttggatgatctc
ctctcgggtttgggttcttcctgtgttgtgcccggtaaaaggagtggcgaacatccccac
acgctgctttattccgttgttttcaagtgcctggagcctgacagtctctacaagttcacc
ctctatgcagtggacagccggggtagtcattctgactccagctacgtctctgtacggacg
tcctgcccgatggttgacgatagccgagctgaagagatcgcagacaaggtgtacaactta
tacaacggctacaccagcggcaaggagcagcagctggcatacaatacattgatggaaatt
cctcctccactgctctaccgagtccagcaccactacaattccctatatgagaagtttggt
gactttgtgtggcgcagcgaagatgagctgggccccagaaaggccaacctgatcctccgg
agggtggacaagatcagccactactgtcgttccctactacacagtacgcatatccagagc
cgtactgacaccatggcgtacgtctactgccgcagcgacgacggacggatgcccgccagc
gagggcgcctggagcggctcgttacacgaaggccgcacagcctgcacggagaagcttatc
tccgtacagcgtaatacatacagcaacaccaaactccggtga
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