Syngnathus scovelli (Gulf pipefish): 125979930
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Entry
125979930 CDS
T08785
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04510
Focal adhesion
sscv04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125979930 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
125979930 (rapgef1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
125979930
NCBI-ProteinID:
XP_049594782
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Position
13:complement(14678751..14696454)
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AA seq
1188 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQLQPEPAAKSAEKPVNKKV
SRLEENEKEVVSALRYFKTIVDKMVVEKKKVLEMLPGSASKVLEAVLNLVQGEARIQHSS
ALSSCHNRVYQSLANLIRWADQVMLEGIDLDDKENVTSVTNVIKAVLDGVKELVRLKIEK
QEQPSPTNPNKPTLPVTAAESGVPSESMIESETAAKAAPTAGPAEAPSDAADEDVAPPKP
PLPEAKMAELRAQLSCDAGQRKPTPKENPPPALPPKKRQSAPSPTRVAVVAPMSRGSSLP
CSVHRQHDHEQEFLQRRFSGGSQSYGGDSPRLSPCSSMGKLSKSDEQLSSVEQDSGQCSR
NTSCETLDNADNYDHDYDFLHQDLSVGDSLPPMPVGGCLSPLPESHSESSSPVPGQHPAH
PRFSAPPPQHPPEYWTPQPGHGNPLARISAPPALPQKKRRSTQTPPFPDGGCKVYERYPS
QYDNLSEEEPPPFPLFTPISPMPQTNGGVFVAQYICGDNADMSASPPPLPEKKSKHILQY
MQFVEDYSEPQPSVFYQMPQSESIYEQRNKRFQEVYGFNDSFSSTDSVHEPLLPPALPPK
QRQLASHSSSPSSSSSSSLSCHLQPSAAASEEAGSALGLSMSVSNCHLIGQAAVTTPTSV
DQAALTSATVPDGRGGGPGPAGSPSASTAARPPSESFLGDSLQASESANDEGGEGEYVNL
YSSSRANGELPLSLRETVTGDGVLQDPAPPTPSTNSKEAVKLERRQESTEESEENVDELS
LIDHKEIMSRITLKQEKDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFISP
EDLIKKLHYRYTSFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILKQLMDLVFTL
VCNGELSLARVLRKNILDKVEQKKLLRYTNSLKPLAARGVSARPGTLHDFRSHEIADQLT
LLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSLIIQQEKAQDREKL
LLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRA
YRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQQFNILDSMRRFQQVH
YELKRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNIARRKTERDEKT
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaaaatcgaaagtaagcaagactcgcagcggtcccacctgtcctcatttacc
atgaagctgatggacaagttccattctcccaagatcaagaggacgccatccaagaaaggc
aagcagctgcagcccgagcccgccgccaaaagcgccgaaaagcccgtcaacaagaaggtg
agtcgactggaggagaacgagaaagaggtggtcagtgccctccgctacttcaagaccatc
gtggacaagatggtggtggagaagaagaaggtgctggagatgctccctggctcggccagc
aaagtgctggaggccgtcttaaatctggttcagggggaggcccgcatacagcacagttcg
gcgttgtcgtcttgccacaaccgcgtgtaccagagcctggccaacctcatccgctgggcc
gaccaggtgatgctggaaggcatcgacctggacgacaaggagaacgtgacgtcggtcacc
aacgtcatcaaagcggtactggacggcgtgaaggagctggtgaggctgaaaatcgagaaa
caagagcagccctcgcccacgaaccccaacaaacccacactgcccgtcaccgcggccgag
agcggcgttccttcggagtctatgatagagtcggagacggcggcaaaagcggccccgacg
gcgggtcccgccgaggccccctcggacgcggccgacgaggacgtggcccctcccaaacct
ccgcttcccgaagccaagatggcggagctcagagcacagttgagttgtgacgctggccaa
aggaagcccactcccaaggagaaccctccgccggccctcccgcccaagaagcggcagtcg
gcgccgtcgccgacgcgtgtggccgtggtcgcccccatgagccggggatccagcttgccc
tgcagcgtccacagacagcacgaccacgagcaggagttcctgcagcggcgcttctcgggg
ggcagccagtcgtatgggggcgactcgcctcgcctgtctccctgcagcagcatgggcaag
ctcagcaagtcggacgagcagctctcctccgtggagcaggacagcggccagtgctcccgc
aacaccagctgcgagacgctcgacaacgcggacaactacgaccacgactacgacttcctc
caccaggacctgtcggtcggggacagcctgccgccgatgccggtgggcggctgcctcagc
ccgctgcccgagtcgcacagcgagtcgtcctcgcccgtccccgggcagcatccggcgcac
ccccgcttcagtgcgcctcccccccagcatccgcccgagtactggacgccgcagcccggc
cacggcaacccgctggcgcgcattagcgcgccgcccgctctgccccagaagaagcggcgc
agcacgcagacgccgcccttccccgacggcggctgcaaggtgtacgagcgctacccctcc
cagtacgacaacctgtcggaggaggagccgccgcccttcccgcttttcacgcccatctcg
cccatgccgcagaccaacggcggcgtctttgtggcccagtacatttgcggcgacaacgcc
gacatgagcgctagcccgccgccgctgccggaaaagaaaagcaaacacatcctgcagtac
atgcagttcgtggaggactactccgagccgcagccgtcggtcttctaccagatgccgcag
agcgagagcatctacgagcagcgcaacaagcgcttccaggaggtctacggcttcaacgac
tctttcagcagcaccgactcggtccacgagccgctcctgccgcccgccctgccgcccaag
caacgacaactggcctcgcactcctcctccccctcttcctcctcctcttcctcgctctcc
tgccacctccagccgtccgcggcggcctcggaggaggcgggctctgcgctgggcctcagc
atgtccgtctctaactgccacctgattggccaagctgccgtgaccacgcccacgagcgtg
gaccaggccgccttgaccagcgccaccgttcccgacggcagggggggaggacccgggccc
gcgggctccccgtccgcctcgacggcggcccggcctccctccgagtcgttcctcggtgac
tcgctccaggcgagcgagagcgcaaatgacgagggtggggagggcgagtacgtcaacttg
tactcgtccagccgggccaatggcgagctgcctctctccctcagagaaacggtcacgggc
gacggcgtgctccaagaccccgcccctccgacgccttccaccaatagcaaagaggccgtg
aaactggaaaggaggcaggagtcaacagaggagagcgaggagaacgtggacgagctgtcg
ctcatcgatcacaaggagatcatgagcaggataacactaaaacaggaaaaagacgacggg
ccggatgtgcgcgctggatcgggagacattttattagtccacgccacagagacggaccgc
aaagatctggttttgtactgtgaagcctttttgactacatataggacgtttatatccccc
gaggacctcattaagaagctacactacagatatacaagtttttgccacagtccagacacg
ttcaagaagcgagtcagcaagaacaccttctttgtgttggtgcgcgtggtggacgagctc
tgcctggtggagctgacagaggacatcctcaagcagctgatggacctggtcttcacgctg
gtctgcaacggggagctcagcctggcccgcgtcctgcgcaagaacatcctggacaaggtg
gagcagaagaagctgctgcgctacaccaactcgctcaagccgctggccgcccgcggcgtc
tcggccaggcccggaacgctgcacgatttccgcagtcacgagatcgcggaccagctcacg
cttctcgacgccgagctcttctacaaaattgagattcccgaggtgttgctttgggccaaa
gagcaaaacgaagaaaagagtcccaacttgacgcagttcacagagcactttaacaacatg
agctattgggtgcgctcattaatcattcagcaagaaaaagcccaggatcgagagaagctg
ctgctcaagttcatcaagatcatgaagcacttaagaaagttgaacaacttcaactcgtac
ctggccatcctctccgccctggactccgcccccatccggagattggagtggcagaagcaa
acgtcggagggattggaggaatattgcacgttgattgacagctcgtcgtccttccgggcg
taccgggccgctctggctgaagtggagcctccctgcatcccgtacttgggtctgatcttg
caggacctgaccttcgtccacctgggcaacccagacctcatcgacggcaaagtcaacttc
tccaagcgatggcagcaattcaacatcttggacagcatgcgccgcttccagcaagtgcac
tacgagctgaaacgcaacgacgacatcgtctccttcttcaacgacttcagcgaccacctg
gccgaggaggcgctgtgggagctgtcgttgaagatcaagccgcggaacatcgcccggcgc
aagacggagcgggatgagaagacttaa
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