Syngnathus scovelli (Gulf pipefish): 125979932
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Entry
125979932 CDS
T08785
Symbol
lrrc8aa
Name
(RefSeq) leucine rich repeat containing 8 VRAC subunit Aa
KO
K22038
volume-regulated anion channel
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125979932 (lrrc8aa)
Ion channels [BR:
sscv04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
125979932 (lrrc8aa)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_R13L1-DRL21
LRR_1
LRR_5
LRR_LRWD1
LRR_9
TMEM100
BPD_transp_2
Motif
Other DBs
NCBI-GeneID:
125979932
NCBI-ProteinID:
XP_049594793
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Position
13:complement(14670549..14674838)
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AA seq
797 aa
AA seq
DB search
MIPITELRYFADTQPAYRILKPWWDVFNDYISVVMLMIAVFGGTLQITQDKMICLPCKWV
ANDSCEAAPAGAPRPGEPRGIQNDLDRHQYSYIDAVCYESKLHWFAKYFPYLVLLHTLIF
LACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEERDSKPLGKANGSNDKR
TLYQPLAASKDVEASMPMLQRTRSKIEQGIVERSETGVLDKKEGEQAKALFEKVKKFRIH
VEEGDIIHRLYVRQTVIKVIMFLLIISYASYYVCYIRFGVMCTVETEKLTGFGTFYCAHP
LATLFQILASFYISLVLVYGLIAMYTLCWMLRRTLKRYSFEAIREEGSYSDIPDLKNDFA
FMLHMLDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTQDKLRQHVSKNSQEKLELHLC
MLSGIPETVFDLPELESLKLEFIPDVTIPPIVAKLSNLRELRLYHTPAKIESAALTFLRE
KLKSLHIKFTDVKEIPLWIYSLKNLSELHLTGNLSADNNRYVALDGLRELKRLKVLRLKS
NLYKLPQVVTDLSAHLQKLSINNEGTKLMVLNSMNKMVNLSELELVHCDLERIPHSIFSL
HNLQEINLKDNNLKTIEEIISFQHLRRLVCLKLWYNQIAYIPIQIGTLNSLEKLYLNRNK
IEKLPGQLFFCHKLRFLDLSHNNLTVIPADVGLLQNLQHFAVTENRIEALPMELFQCKKL
RVLQLANNCLETLPACVGELAGLTQLELRGNNLESLPPELAECRLLPRGGLVVEEKLFNT
LPPEVKEQLLSADKEKA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgatccccatcacagagctgcgctacttcgccgacacccagccggcgtaccgtatcctg
aagccgtggtgggacgtcttcaacgactacatctcggtggtcatgttgatgatcgccgtg
tttggcggcacgctgcagatcacgcaggacaagatgatctgcctgccgtgcaagtgggtc
gccaacgactcgtgcgaggcggcgcccgccggcgccccgcggccgggggagccccgtggc
attcagaacgacctggaccgccaccagtacagctacatcgacgccgtgtgctacgagagc
aagctgcactggttcgccaagtacttcccctacctggtgctgctccacacgctcatcttc
ctggcctgcagcaacttctggttcaagttcccgcgcaccagctccaaattggagcacttt
gtctccatcctgctaaagtgcttcgactcgccgtggactaccagggcgctgtcggagacg
gtggtggaggagagggactccaagcctttggggaaggccaacggctcgaacgacaaaagg
accctgtaccagccgctggccgccagcaaggacgtggaggccagcatgcccatgctccag
agaacgaggagcaaaatcgagcagggcatcgtggagcgatcggaaacgggcgttctggac
aagaaggaaggggagcaggccaaggctctctttgagaaggtgaagaagttcaggatccac
gtagaagaaggcgacatcatccaccgtctgtacgtgcgtcagacggtcatcaaagtcatc
atgtttttgttgatcatcagctacgccagctactacgtttgctacatccgcttcggcgtc
atgtgcacggtggagacggagaagctgacgggcttcggcaccttctactgcgcccacccg
ctggcgaccctcttccaaatcctggcgtccttctacatcagcctggtgctggtgtacggc
ctgatcgccatgtacacgctgtgctggatgctgcggcgcacgctcaagcgctactccttc
gaggccatccgcgaggagggcagctacagcgacatccccgacctgaagaacgactttgcc
ttcatgctgcacatgctggaccagtacgacccgctctactccaagcgctttgccgtcttc
ttgtcggaggtgagcgagaacaagctgcggcagctcaacctcaacaacgagtggacgcag
gataagctgcggcagcacgtctccaagaactcccaggagaagttggagctgcacctgtgc
atgctgagcggcatccccgagaccgtctttgacctgccggagctggagagcctcaagctg
gagttcatccccgacgtcaccatcccgcccatcgtggccaagctgtccaacttgcgcgag
ctgcggctctaccacacgccggccaaaatcgagtcggccgccctcaccttcctgcgagag
aagctcaagtccctgcacatcaagttcaccgacgtcaaggagatcccgctgtggatctac
agcctcaagaacctcagcgagctgcacctgacgggcaacctgagcgccgacaacaaccgc
tacgtggccctggacgggctgcgggagctgaagaggctcaaggtgctgcggctgaagagc
aacctgtacaagctgccgcaggtggtgaccgacctgagcgcgcacctccagaagctttcc
atcaacaacgagggcaccaagctcatggtgctcaacagcatgaacaagatggtcaacctg
agcgaacttgagctggtgcactgcgacctcgagcgcatcccgcactccatcttcagcctg
cacaacctgcaggagatcaacctgaaggacaacaacctgaaaaccatcgaggagatcatc
agcttccagcacctgcgccgcctggtgtgcctgaagctctggtacaaccagatcgcctac
atccccattcagatcggcaccctcaacagcctggagaagctctacctcaacaggaacaag
atcgagaagctgcccggccagctcttcttctgccacaagttgcgctttctggacttgagt
cacaacaacctgactgtcatcccggccgacgtgggcttgcttcagaacctgcagcacttt
gccgtcacagaaaaccgaatcgaggcgctgcccatggaattgttccagtgcaagaagctg
cgcgtgctgcagctggccaacaactgcctggagacgctgccggcgtgcgtgggcgagctg
gccggcctgacccagctggagctgcggggcaacaacctggagagcctgccgcccgagctg
gccgagtgtcggctgctgccgcgcggcggcctggtggtggaggagaagctgtttaacacg
ctgccgcccgaggtcaaggagcagctgctgagcgcagacaaggaaaaagcctga
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