Syngnathus scovelli (Gulf pipefish): 125979961
Help
Entry
125979961 CDS
T08785
Symbol
ccbe1
Name
(RefSeq) collagen and calcium-binding EGF domain-containing protein 1
KO
K19638
collagen and calcium-binding EGF domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
125979961 (ccbe1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
cEGF
FXa_inhibition
EGF_CA
EGF
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
125979961
NCBI-ProteinID:
XP_049594834
LinkDB
All DBs
Position
13:complement(9258368..9274008)
Genome browser
AA seq
397 aa
AA seq
DB search
MNPGHARILLAAVTCVLLISGASPRSQRQEDAHLSDSEECSDNISTTKYSCVKSSGEVAT
CYRKQCCRGFKFVLGQCIPEDYDVCAGAPCEQQCSDHFGRVVCTCYPGYRYHRERHRNRE
KPYCLDIDECSDTNTTVCSQLCINTVGSFHCKCHPGFFLEEDGQTCSKEGRVLHHVLETS
DNVMNTGTCSATCDDFQQIKTTVLQLKQKILSSSSNVPEQRTNDKIPATFLTGPPGLPGP
PGDPGPKGAPGLVGQSGPLGPPGPRGLMGPMGPTPDLSHIKRGSRGPVGPPGAPGKDGHK
GERGAPGPAGPPGPPGSFDFLLLLMADIRNDIADLQIKVYGRAPVYPGEELPVMPGAWRD
SQDMGSGEDFRETMSPPHSKRTRKRKPPRSRTDSNGL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccggacacgctcggatcctactcgctgccgtcacctgcgtactgctcatctcc
ggagcttcgccgaggtcacagcggcaggaggacgcccacctcagtgacagtgaagagtgt
tcagataacatctccacaaccaagtactcttgcgtcaagtccagtggggaagttgcgaca
tgctacagaaagcagtgctgccgggggttcaagttcgtgctgggccagtgcattcctgaa
gactacgacgtgtgcgctggcgctccctgcgagcagcagtgtagtgatcactttggccgc
gtggtgtgcacctgttaccccggctaccgttaccaccgcgagcgacaccggaaccgtgag
aagccctactgcctggacattgatgaatgcagtgacacaaacacgacggtgtgctcccaa
ctttgcatcaacacggttgggagctttcattgcaagtgccatccgggcttcttcctggag
gaagatgggcaaacatgcagcaaagaaggaagagtgctgcatcatgtcttggagacatct
gacaatgtgatgaacacggggacctgctcagccacgtgtgatgacttccagcagatcaag
accaccgtgttgcagctaaaacagaagatactgtcgagcagttctaatgttccagagcaa
aggaccaacgacaaaatcccagctacctttttaacgggaccgccgggcctgcctggtccg
ccaggagatccgggacccaaaggagcaccgggtcttgtaggacaatcagggcccttgggc
cctcctggaccaaggggcttgatgggtcccatggggcccacaccagacttgtcccacatc
aaacgaggctctcggggacctgtggggcctccgggagcaccgggaaaagacgggcacaag
ggggagcgaggagcacccgggccagctggacctccaggccctccaggctctttcgacttt
ctactattgcttatggctgacatccgcaatgacatcgccgacctgcagatcaaagtgtac
ggccgagcgcccgtctacccgggggaggagctccctgtgatgcctggcgcctggcgagac
agccaagacatgggctcgggcgaggacttccgagagacgatgtcaccgccgcactccaag
aggacccgcaagagaaagccgccgcgaagcaggacagacagcaatggactctaa
DBGET
integrated database retrieval system
