Syngnathus scovelli (Gulf pipefish): 125980054
Help
Entry
125980054 CDS
T08785
Name
(RefSeq) synaptic vesicle glycoprotein 2C
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125980054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125980054
Transporters [BR:
sscv02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
125980054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
Pentapeptide_4
MFS_2
Phe_tRNA-synt_N
DUF6077
Motif
Other DBs
NCBI-GeneID:
125980054
NCBI-ProteinID:
XP_049594997
LinkDB
All DBs
Position
13:complement(10464223..10485603)
Genome browser
AA seq
734 aa
AA seq
DB search
MNETHNNRTSLVKGAKDIAKEAKKQAGKNFNKAVDRASDEYSAHRSYDRFQNDEEEENEY
NSYGQADRRYGDDAAEEGASSDATEGHDDEDEIYEGEYQGVPAYQDAKQRDGQMPLGQLA
GDAPKSHKELENERQADEEELAQQYELIMQECGHGRFQWQLFFVLGLALMSDGVEVFVVG
FVLPSAETDMCVPNSGAGWLGSIVYLGMMFGAFFWGGLSDKLGRKQCLLISLSTNGFFAF
LSSFVQGYSTFLFCRMLSGFGIGGAVPIVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYA
SAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVSAVVALTFMPESPRFFLQMGKH
DEAWMVLKHIHDTNMRARGEPERVFTVNRIKIPKLLNELVELQNESSNPVVKFFSKVKAE
LRGIWSTFMKCFDYPVKDNTMKLAAVWFTLSFGFYGLSVWFPDVIKHLQADDYASRVKIH
TNERIEDFTFNFTLENQIHRNGVFYNDRFISMKFKAVSFVNSSFFNCYFEDVSSVGSSFK
NCTFVDSLFYNTDIDDMKLTNSRLVNSSFHHNKTGCQMTFDDDYSAYWVYFVNFLGTLAV
LPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISAWNS
LDVVTTELYPTDRRGTGFGFCNALCKLAAVLGNLIFGSLVGITKAIPILLASSVLVCGGL
VGLRLPDTRANVLM
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaacacacaacaacaggacttccctggtcaaaggggccaaggacatcgccaag
gaagccaagaagcaagccgggaagaacttcaacaaggcggtggaccgcgcctcggatgaa
tactcggcgcaccgtagctacgatcgattccaaaacgacgaggaggaggagaacgagtac
aattcatacggacaagcggacaggcgctacggcgacgacgcagccgaggagggggcgtcc
agcgatgccacggagggccacgatgacgaagatgagatctacgagggtgagtaccaaggc
gtgcccgcctaccaggacgccaaacagcgggacggacagatgcccctgggccaactggcg
ggtgacgctcccaagagccacaaggaactggagaacgagcgtcaggccgacgaggaggaa
ctggcgcagcagtacgagctcatcatgcaggagtgcggccacgggaggttccaatggcag
ctcttcttcgtgctgggcctggcgctcatgtcggacggcgtggaggtgttcgtggtggga
ttcgtcctgcccagcgccgagacggacatgtgcgtgcccaactcgggcgccggatggctc
ggcagcatcgtgtacctggggatgatgttcggcgctttcttttggggcggcctgtcggac
aagctgggccgcaaacagtgcctgctgatatccttgtccaccaacggcttcttcgccttc
ctctcctccttcgtgcaaggctacagcaccttcctcttctgccgcatgctgtcgggattc
gggattggcggcgcagtgcctattgtgttttcgtactttgcggaagtgctggcgcgggaa
aaacgcggagagcacctgagttggctctgcatgttctggatgatcggcggcatctacgcc
tcagccatggcttgggccatcataccacactatggttggagttttagcatgggctcggcc
taccagttccacagctggcgagtgtttgtggtggtgtgtgcgctgccttgcgtctcagct
gtggtggcgctcaccttcatgcctgagagccctcgcttcttcttacagatgggcaaacat
gacgaggcctggatggtcctcaagcatatccatgacaccaacatgcgagctcgcggagag
cccgagagagtcttcactgtcaatcggattaagatccccaagctgctgaacgagctggtg
gagttgcagaacgagtcttcaaacccagtggtcaagtttttctccaaagtcaaggccgag
ctccgagggatctggtcaactttcatgaaatgttttgactacccagtaaaagacaacacc
atgaaactagcagcggtttggttcacgctctcctttgggttctacggattgtctgtgtgg
ttccccgacgtgatcaagcatctgcaagccgacgattacgcctcgcgagtgaagatccac
accaacgaacgcatcgaagatttcactttcaacttcacgctggagaaccagattcacaga
aatggcgttttctataacgacaggtttattagcatgaagttcaaggcggtctcgtttgtc
aactcctcgttcttcaactgctactttgaggatgtctcatccgtgggctcctccttcaaa
aactgcacctttgtcgattccttgttctacaacacagatatcgacgacatgaagctgaca
aactcaaggctggtcaacagctccttccaccacaacaagacgggctgtcagatgaccttc
gacgacgactacagcgcgtactgggtctactttgtcaacttcctgggaacgctggccgtc
ctccccggcaacatcgtctcggccctcctcatggacaaaataggccgtcttagcatgttg
gggggctccatggtgctgtctggaatcagctgcttcttcctgtggtttggcaccagcgag
tccatgatgatcttcatgttgtgcctctacaacggcctcagcatctccgcctggaattcc
ctggatgtggtcaccaccgagctctaccccaccgacaggagaggcaccggctttggcttc
tgcaacgccttgtgcaaactggccgccgtgctgggcaacctgatctttggctctctggtg
ggcatcaccaaggccataccaatcctgctggcgtcgtccgtgctggtctgcggcggcctg
gtgggcctgcggctgcccgacacacgcgccaatgtcctcatgtaa
DBGET
integrated database retrieval system
