Syngnathus scovelli (Gulf pipefish): 125980065
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Entry
125980065 CDS
T08785
Name
(RefSeq) RNA-binding protein 4.1
KO
K13187
RNA-binding protein 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125980065
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125980065
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RNA_bind
RRM_7
Calcipressin
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
125980065
NCBI-ProteinID:
XP_049595020
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All DBs
Position
1:complement(27734589..27738078)
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AA seq
342 aa
AA seq
DB search
MVKIFVGNLPQEATEEEIKALFLEHGTVTECSIVKNFAFVHMDDRKAATKAIKALHLHKL
HGSQINVEASHGKNYGAVKLHVANVERGMEEELRALFEEYGKVTECAIIKNFAFVHMPNS
DEAMDAIQGIDNIEFQGKRIHVQISKSRPRDEQEDYPPPPDGGGFWPPPFPGNRLEPPPP
GFMRGRPMGPGYPAPPLPPPPPRRAMYPESPYEGDHGGYGVVDYYEKYRARPYGMGPGGP
PPPPPPPPPPPGVSRMNSPLDPYERRPPPPPPPPSAYYGRDRSPHRRAPNAASPPTGNGY
AYERSSIAPVSRVPPYGLPRPRDPYAPRLPPPPPPPPSRYDY
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatatttgtcgggaacctgccccaagaggcaaccgaggaggaaatcaaggcc
ctcttcttggagcacggcacagtcaccgaatgttccatcgtcaaaaacttcgctttcgtc
cacatggatgaccgcaaggctgcgacgaaagccatcaaggccttgcatctccacaagctc
cacggctcgcagatcaacgtggaggccagccatgggaagaactacggcgcggtcaagctg
cacgttgccaacgtggaaaggggaatggaagaagaactccgagcgttgttcgaagagtat
ggcaaggtcacggagtgtgccattattaagaattttgcttttgtgcacatgccaaattct
gatgaggccatggatgccatccagggaattgacaatatagaatttcagggtaaacgcatc
cacgtgcagatttccaaaagtcgcccccgtgacgagcaggaggactaccctcctccccca
gacggtggcgggttttggcccccgcctttcccgggaaacaggctggagcctcccccgccg
ggcttcatgagaggtcgccccatgggccccggttaccccgcccctcctttgccacccccg
cccccgaggcgagccatgtaccccgaaagtccttacgagggtgatcacggcggttacggc
gtagtcgattactatgaaaaatacagagcccgtccttacggcatgggtccgggtggtcca
ccgccgccccctccgccgcctcctccccctcccggcgtctcgcgcatgaactcgccgctt
gacccgtacgagcgtcggccgccgcctcccccccctcctccgtcggcgtactacggccga
gatcgcagcccccaccgcagagcgccaaatgcggcctctcctccgaccggtaacggctac
gcctacgagcgctccagtatcgctcccgtttcccgggtcccgccgtacggacttcctcgg
cccagggacccttatgcaccgcgactgccgcctccgcccccgccgccgccttcacgctac
gattattaa
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