Syngnathus scovelli (Gulf pipefish): 125980074
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Entry
125980074 CDS
T08785
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A
KO
K17906
autophagy-related protein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04136
Autophagy - other
sscv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125980074 (atg2a)
04136 Autophagy - other
125980074 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125980074 (atg2a)
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125980074 (atg2a)
Membrane trafficking [BR:
sscv04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
125980074 (atg2a)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125980074 (atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
125980074
NCBI-ProteinID:
XP_049595078
LinkDB
All DBs
Position
1:complement(22329442..22347094)
Genome browser
AA seq
2013 aa
AA seq
DB search
MSHWLFPWSGSIKKRACRYLLQHYLGHFLQERLSLEQLGLDLYNGSGVIKEINLDVWAVN
ELLENLGAPLEIVDGFVSSITVTIPWQALLTDHCTLEVSGLQITCRPKYRIGGGWDSQSW
SSSMTSSMQLAQECLKDPPETSEEPPAPLEGLEMFAQTIETVLRRIKVTLLDTIVRIEHQ
PLDLETGIALEVHIKRLEYFDEAVRDPSNQTAVPVDIHQPPAFLQKILQLSAVQLLYDCI
GTEQEVPEEKKTESAACSEGEKEQEENDDDEQVEGKGKPLKLSPSQPLLIGSCSGFIETT
IKIKQNDMLPGPKFELDGKVGCVHMLLSPAQITHLTDLLAALCIETESETKLGGVRNRPL
DSDDLRLIEEDLSKQLGSSPRETDWDAECDLEPYVTTLENGEMFYSMGPAGMSSSVTSMR
SGSELSDSDMDSSTHSLASLSQPGALAAQGLMSCPRRYPVAGCLSSLPQGSHRIRGRSQS
SNAEQLKPDALLRLTLGGLTLTMLQDDPPSKPDNAPSLAQMSQVFFQELASFKDSMFGER
DFHHLRSGFAKACPHSHVRVTGAAVQVSCEMRSGRRHSRAVTSDVSFSRLEMLECLWENN
KPQYSELLQFQKASMFTVGVAARPCAQLHYSLTEKHLRKGKQRVVRCDSVARVELEDLST
ELDLDIISRLGNLNNAFRRCPAEPAGPDNLQMRSSELYSSFSLLAPHAVVRLRFPIPDLR
PLSEREPMSQRAVREESLVLELTELELRHQEAPDLQSGQPNQGQLSAPCLTQLLEASFTD
LHGSYEGWEGGPFPCIRVKRSHDSLPRLSIRVRGGEAQGAAVGLAGLNLGLAQDLGAAFF
ESHCELNDKTSSPFSSNRTMFETEEMVIPADPEEMSQFQAQCVAQSQCAVDIRFPLAYVL
LPSKQAFQSIYNRINNDLLMWEPPHPAPSSAHSPMPSHQQHDEFQLCKSAFRLDSDSEED
EPQFYLASEPSGRRKLALQHNPNHNLSLLSLTVNIGKGRLQARTDKKEDQSHGEIVLDLE
GGKIFSVAQHQNDPNLSFLCLESQRVELYHKAVVKDTAIPLRIEMPNFISPKYLHPTIYP
TEVGVSSVSGREAEPQMLSTAIKITLDPLRKVKEFLVALRLQGATMRHYVAQTNHSWHEQ
LVDFLDVIDDPILGYTAPAVITVLHTHLATCAVDYRPLYLPLRMLLTAESFSLSSNIIVD
TATFHLRFILDDSALYLSDKCDSDVVDLRKDYICVLDMDLLELAITTWKGSDTGKLAQPL
FELRCSNNVVHVHACADSCAALVNILQYLVSQGDLHPPPRHASPTEIAGQKLPLSESPAS
VLPCPAAETAEINQCDLTDALIDTDKSHQEERIDPGSPSMPRGSPVSVYLFPGEGSRHDL
SVLEEKEELDSQVTTATEAQADMMEDESSEGSTDNDDFCILEAPGMGIAPRDGEPVVTVL
VEDPIHVKDSHFSRPRGSSDLLRAPSRFPVPQSRVVLREISVVWHLYGGKDFGSKLSSIH
SQHGIRGRSVPSGARSSPSRSAGSSRPQNSWRWAGGSGRQHGLLMEIQLTKVSFQHESYP
LVVAGQDGETSASVGVSPGGEQPISRQVFIVQELEVRDRLASSQINKFLYLYTSESMPRR
AHSNMLTIKALQVCPESGLGGPECCLRVSLLPLRLNIDQDALFFLKDFFSNLACSVNPYH
PVDPASEVRADASQKASEEVETGGALGLDLTSSVETTHSEQSSSSVGSTSSSEQPIYFRE
FRFTSEVPIWLDYHGKHVVIEQGTFAGILIGLAQLNCSELKLKRLCCRHGLLGVDKVIQY
AVSEWLADIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWLPIEQYRKDGRIIRGLQRGAA
SFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPLNRYAVTEGRAPSSRPRRPAQPA
DLREGVAKAYDTVREGVIDTAQTLCDVASRGHEQKGLPGAVGGVLRQIPPTVVRPLIVAS
EATSNLLGGMRNQIKPDARKEDFLKWRTEDYQE
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactggctcttcccctggtcgggctccatcaagaagcgggcctgtcggtacctc
cttcagcactaccttggccactttttgcaggagcgcctgagcttggagcaactgggcttg
gacctgtacaatggcagcggggtcatcaaagagatcaacctcgacgtgtgggctgtcaat
gagcttctggagaacctgggcgccccactggagatagtggatggctttgtgagcagcatc
acagtgaccatcccctggcaagctctgctcacagaccactgcaccttggaagtgtccggc
ctccagataacatgcagacccaagtacagaatcggtggtggctgggactcgcaaagctgg
tcatccagcatgacctccagtatgcagctggcccaggagtgcctgaaggaccccccggag
acgtccgaggagccgccggccccgcttgaggggctggagatgtttgcacaaaccatagag
acggtccttcgtcgtattaaagtcaccctcctggacaccatcgtacgcattgagcaccag
cccctggatctggaaacaggcattgccttagaggtgcacatcaaacggttggagtacttt
gacgaggcggtgcgcgacccatccaaccagactgctgtgcctgttgacatccaccagcca
cccgccttcctgcaaaagatcctccagttgagtgccgttcagctcctctacgactgcatt
ggcacggagcaggaagttcctgaggagaaaaagacggagtcagctgcttgcagtgaagga
gagaaggagcaggaggaaaatgacgatgatgagcaagttgaaggaaaagggaagcctctg
aagctttccccatctcagcccttgcttataggcagctgctcaggtttcatcgagaccaca
atcaagataaagcagaacgacatgttgcctggaccaaagtttgagttggatgggaaggtg
ggctgtgtccacatgctgctgtctccagctcagataactcacctgactgacctgctggca
gctctttgcatagaaacagagtccgagaccaaactgggtggcgtgcgcaaccgcccgcta
gactcggacgacctgcgtctgatcgaagaagacctcagcaagcagttgggctccagtccc
agagaaacggactgggatgcagagtgcgacctggagccctatgtcactactctggaaaat
ggagaaatgttctattctatgggtcccgcggggatgagcagcagtgtgacgtcgatgcgc
tctggcagcgagttgtcagacagtgatatggactcttccacgcacagtctggcgagcctc
tctcaacctggagcgctggctgcacagggcctcatgagctgtcccagacgttacccagta
gcaggttgtctctccagtctaccacaaggaagtcatcgaatcagaggtcgttctcaaagt
agcaatgctgagcagctgaagcccgacgccttgcttcgtctgactttgggcggactcact
ctaaccatgctgcaggacgacccgccctccaagccggacaacgccccttcattggctcag
atgtcccaggttttcttccaagagcttgcctcctttaaggacagcatgttcggcgagaga
gactttcaccacctaagaagcgggttcgccaaagcctgccctcactcgcacgtcagagtg
acgggggcagcggtgcaggtttcctgtgagatgcgcagcgggagacgccacagtcgagcg
gtgacctccgacgtctccttcagcagactagaaatgttggagtgtctctgggagaacaac
aagcctcagtacagtgagttgctccaattccagaaagccagcatgttcactgtgggagtt
gcagccagaccatgtgcccagctgcactacagcctcactgagaaacacctgaggaagggt
aaacagcgggtggttcggtgtgacagcgtggcacgagtggagctggaagatctcagcacc
gagttggacctggacatcatcagtcgactggggaatctgaacaatgccttccgtcgctgt
cctgcggagccagctggacccgataatctccagatgcggagcagtgagctgtactcctct
ttctccctcctcgccccgcacgccgtcgtcagacttcgattccccattccggacctgcgc
cccctctctgagcgcgagcccatgagccagagggcggtgagggaggagtcactggtgttg
gagctgaccgagctggagctcaggcaccaggaagcgccggacctccagagcgggcagccc
aaccagggtcagctttcggccccctgcctcactcagctgctggaagcctcctttacagac
ctgcatgggtcgtacgagggttgggagggaggccccttcccctgcatcagagtgaagagg
agccatgactctctgcccaggctatccatacgggtgcgtggaggtgaagcgcagggagcg
gctgtgggtctggcaggactgaacctgggcctcgcccaagacctgggggctgccttcttt
gaaagccactgtgagctcaacgataaaacaagctcgccgttctcctccaaccgcaccatg
ttcgagacggaggagatggtgatccctgcagaccccgaggagatgagtcagtttcaggcc
caatgtgtagcccagtctcagtgtgctgtggacattcggtttccactggcctacgtcctt
ttgcccagcaagcaagcgttccaaagcatctacaacaggattaacaatgatctgctgatg
tgggagccgcctcaccccgccccatcctcagcccacagccccatgcccagtcaccaacag
cacgacgagttccaactctgcaagtcggcctttcgacttgactccgactcagaagaagat
gagcctcagttctatttggccagtgaaccatcaggaaggagaaagttggcgctccagcat
aatccgaaccacaacctcagcctcctctctctcactgtcaacattggcaaaggtcgcctc
caagccaggacagacaagaaggaggaccagagtcatggagaaattgtgctcgacctggaa
ggagggaagatattcagtgtagcgcagcaccagaatgaccccaatctcagttttttgtgt
ttggagagtcaacgagttgagctgtaccataaagctgtcgtgaaagacacagctattccg
ctacggatagaaatgcccaacttcatttccccaaagtacttgcacccaaccatctacccc
actgaggtgggagttagcagcgtgagcggccgggaggcggagccgcagatgttgtccacg
gccatcaaaatcactctggacccgctgagaaaggtcaaggaattccttgttgcccttcga
cttcagggcgccaccatgcggcattacgtggcgcagaccaatcacagttggcatgagcag
ttggttgactttctggatgtcattgatgacccaattttgggatacactgcacccgctgtc
attaccgtcctccacacacatctggctacatgtgcagttgactacagaccgctctatttg
cctctacggatgttgctcacagcagagtccttctccctgtccagtaatatcattgtagac
acagccacctttcacctcagattcatcttggatgactccgccctctacctctctgacaaa
tgtgatagcgatgtagtggacctgaggaaggactacatttgtgttttggacatggacctg
ctagagctcgccatcactacgtggaaaggcagcgacacgggcaagctggcccagcctttg
tttgagctgcgatgttccaacaatgtagttcatgtccacgcgtgtgccgattcgtgcgcc
gccctggtcaacatactacagtacctcgtctcccagggtgacctgcatccaccgccccga
cacgcctcccctacggaaatagccggccagaaactaccgctttctgagagccccgcgtct
gtgctgccatgccctgctgctgaaaccgctgagattaaccagtgtgatctgactgatgcc
ttaatagacaccgacaagagccaccaagaagagagaatagatccaggctcgccctccatg
ccgagaggatcgccggtctcggtctacttgttccctggcgagggctccagacacgatctc
tccgtgctggaggagaaagaggagctcgacagtcaggtcaccacggcaaccgaggcgcag
gctgatatgatggaagacgaaagttcagaaggttccactgacaacgatgacttctgcatc
ctggaggctcctggcatgggcattgctcctagagacggcgaacccgtggtgacggtgttg
gtcgaggatcccatccatgtgaaggacagccacttctccaggccgcgaggaagctccgac
ctgcttcgcgctcccagccgcttccccgtaccacaaagccgggtggtgctgcgggagatc
tctgtggtgtggcatctctatggcggcaaagactttggttccaagctctcgtctatacac
agccagcatggaattaggggtcgatccgtcccgtctggtgcccgaagctcaccatctcgc
tccgcgggttcttctcgtccccagaactcgtggcggtgggctggaggtagcggccgtcag
catggactcctcatggagatccaactcaccaaggtgtccttccagcatgagtcctacccg
ctggtggttgccggacaagacggtgagacctctgcgtccgttggggtcagtccgggaggg
gagcagcccatctccaggcaggtttttatcgtccaggagctcgaggttcgcgaccgcctg
gcttcctcgcaaatcaacaaattcctttacctctacacgagcgagagcatgccccgaaga
gcccattccaacatgttgaccataaaggccctgcaagtttgtcccgagtctggtcttggt
ggtccagagtgttgcctccgagtcagcctgctgccactcagacttaacattgaccaggat
gcattgttcttcttgaaggactttttcagcaatttagcttgttctgtgaacccctaccac
cctgtggatcccgcatctgaagtgagagcagatgcctcccagaaagcgtcagaagaagtg
gagacaggcggcgctttgggattggatctcacgtcttcagtagaaactactcacagtgag
cagagctcctcctcagtcggctctacctcctcctccgagcagccgatctacttccgcgag
tttcgtttcacctccgaagtgcctatctggctggactatcatggcaaacacgtggtcatc
gaacagggaacctttgccgggattctgattggtctggctcagttgaattgttccgagctg
aagctgaagaggctctgctgtcgacacggcctgctgggtgttgacaaagtgatccagtac
gctgtcagtgaatggctggcggacatcaggaagaatcagctgccgggtattcttggaggc
gtcggccccatgcactcggttgtccagctgttccacggggtgagagatctcttctggctg
cccatcgagcaatacaggaaagacgggcggattatccgaggtctccagagaggggccgcc
tccttcggcacatccacagcgtcggcggcattggaactcagcaacaggctggtgcaggcc
attcaggccaccgccgaaacggtgtatgacatcctgtccccaacgcctcccttgaaccgc
tacgccgtcacagagggacgggccccttccagtcggccacgccgcccagcccaacccgct
gacctccgagagggcgtcgccaaggcgtatgacactgtcagagagggagtgattgacaca
gctcagaccctttgcgatgtagcatcccgtgggcatgaacagaaaggtcttcccggtgcg
gtgggcggcgtcttgcggcagatcccacccaccgtggtgcgcccgctcatagtggcatca
gaagccacctctaatctgcttggcggcatgcggaatcagatcaaaccagatgcaaggaag
gaggacttcttgaagtggcgcacagaggactaccaagagtga
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integrated database retrieval system
