Syngnathus scovelli (Gulf pipefish): 125980112
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Entry
125980112 CDS
T08785
Name
(RefSeq) programmed cell death 1 ligand 2-like isoform X1
KO
K06745
programmed cell death 1 ligand 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125980112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sscv04090
]
125980112
CD molecules [BR:
sscv04090
]
Proteins
125980112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
ig
C2-set_3
Ig_2
C2-set_2
DUF6377
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
125980112
NCBI-ProteinID:
XP_068508878
LinkDB
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Position
13:complement(10000308..10005047)
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AA seq
333 aa
AA seq
DB search
MTWSKVFILQFLFQPCLQVLLTADAERVSYSAQMGGEVLMGCHFYPLSPHPHEDWMMTWY
WRSRASPRLVSHLESGLEQDSFQHPDFKGRARLLTEEIKDGRAILQVSRLRINDSGNYQC
VVQTRNGVNYTDIKLSVTAPYKTVTKTISKTVTGGKLVLTCLSEGYPMSTVAWEDGHGRN
LNASTSVVTTDEGLYRITSGIQVGSWQENNYTCRFDSRSSSATFLIPDETQKPKENANNA
VVIGACIVIVFTIVLVIVLILWWQKGHSRKEQKISWKQKEEETNSIFTEDCKVNQQLEVL
KDPLTPKPDGNVELPACRNCLVSKIPKLHLLPS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacttggtccaaagtttttattttgcaattcctgttccagccctgtctccaagtcttg
ttaaccgctgatgccgaacgagtctcatacagtgcccaaatgggaggagaagtgctaatg
ggctgccacttctaccctttgtcaccgcatccccatgaggactggatgatgacttggtac
tggaggtccagggcttcgccccgcttggtgtcccacctagaaagcgggctggagcaagat
tctttccagcatccggactttaagggtcgggccaggcttctcaccgaggaaattaaagat
ggccgggctatactgcaggtgtccaggcttcgcatcaacgactcgggaaactaccagtgt
gtggtgcagacgaggaacggggttaactatacagacattaaactatctgttactgcacct
tataaaacagtcacaaaaaccatttccaagacggtaaccggaggcaagctcgtgttaacc
tgcctatccgagggctacccgatgtctacggtggcttgggaggatggtcacgggcgaaat
ctcaacgccagtaccagcgtcgtgacgacagatgagggcctctacagaatcacatctggg
atacaggtgggatcatggcaggaaaacaactacacctgccgctttgatagtagatcctcc
tctgcaacatttcttatcccagatgaaacccagaaaccgaaggaaaacgcaaacaatgca
gtagtaattggcgcatgtatcgtaatagtatttacgattgtcctcgtcatagtgctaatt
ctctggtggcaaaaaggtcactccaggaaagaacaaaagatatcatggaagcaaaaagag
gaagaaaccaattctatttttactgaggattgcaaagtgaaccaacagctggaggttttg
aaagatcctctgacgccaaaaccagatggaaacgtggagctgcccgcatgcaggaattgc
ctcgtcagtaaaattcccaagttgcatttgttgccatcatga
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