Syngnathus scovelli (Gulf pipefish): 125980190
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Entry
125980190 CDS
T08785
Symbol
dnai2b
Name
(RefSeq) dynein axonemal intermediate chain 2
KO
K11143
dynein axonemal intermediate chain 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125980190 (dnai2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125980190 (dnai2b)
04812 Cytoskeleton proteins [BR:
sscv04812
]
125980190 (dnai2b)
Cilium and associated proteins [BR:
sscv03037
]
Motile cilia and associated proteins
Dynein arm
125980190 (dnai2b)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125980190 (dnai2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_EIPR1
WDR55
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
125980190
NCBI-ProteinID:
XP_049595263
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All DBs
Position
13:complement(12319503..12325038)
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AA seq
574 aa
AA seq
DB search
MEIVHEYTKPRRDFGRQCFFSDRPAELLADVPPDLDLALQFMTRSRSAQALQCSRDMSEH
QVNTERFESESRGINHVEGGWPKDINPQEMEQTIRFRKKVEKDENYLNSLMQLGDVIGHC
VGQNTAVDIYQKYFEDEEPRDQSQEPPSAKTINVFRDLNQVKRTVTCLSWHPDGGRKLAA
AYSCLEFQKASTDMSPDAYIWDIENPNKPELTLKPASPLVCLDYNPKDPHTLVGGSYNGQ
IVFWDTRKGSQPADVSSLEQSHRDPVYKAIWLQSKTGTEAFSASTDGQVLWWDVRRLSEP
TEQLILDLGREGNLDRALGAISLEFEPTMPTKFMVGTEQGTVVSCNRKAKTPAEKIVSTY
DCHHGPVYALQRNPFFPKNFLTVGDWRARIWSEDIKESSIMWTKYQMSCLTDACWSPIRP
SVFFTVKMDGVLDIWDVLFKQTEPTLSVKVCDEALYSLRLHESGRLVACGSQQGSATILE
ICSGLSNLQKNEKSLMAEMLEREAKREKILEARQKELRLKERSRSEQSREDEAGRDAAER
EETPEQLIARAEQDFFSMVEAEKRRRREREEIGS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggagattgttcatgagtacacaaagccccgcagggattttggccgccaatgttttttt
tctgaccgaccggcagaacttcttgcggacgtgcctcctgatttggaccttgcgctgcag
ttcatgacgagaagcaggagcgctcaggcgctgcagtgttcgagggacatgtccgaacac
caggtaaacacagaaaggtttgaatcagaaagccgtggaataaaccacgtggaagggggg
tggcccaaagacattaacccccaagagatggagcaaaccattcgtttcaggaagaaggtt
gagaaagatgagaactacttgaacagcctcatgcaacttggcgatgttatagggcattgc
gttggacagaacaccgccgttgacatctaccagaagtactttgaagatgaagagccacgg
gaccaaagtcaggaaccgccatctgctaagaccatcaatgttttcagagatctgaaccag
gtgaaacgaaccgtcacctgtctgtcctggcaccctgacgggggacggaaactggctgct
gcctactcatgcttggagttccagaaagcttccacagacatgagcccggatgcatacatc
tgggacatagaaaatcccaacaagcctgagctgaccctgaagccggcgtctcctcttgtc
tgtttggactacaatcccaaagatccgcacactcttgtcggcgggagctacaatggacag
atcgtgttctgggacacccgtaaaggcagtcagcccgcagatgtttcctctctggagcag
agtcacagggatccagtctacaaagccatttggttgcaatccaagaccgggacagaagcc
ttctctgcatccaccgatggacaggtcctatggtgggacgtccgtcggctgagcgagcct
acagagcagttaattctggacctgggtcgggaaggaaacctggatcgggcattgggagcc
atctctctggaattcgaacccaccatgccaaccaaattcatggtggggaccgagcagggc
actgtggtgtcctgtaacaggaaggcaaagactccagctgagaagatagtgtctacctac
gactgccaccacggacccgtctacgccttgcagaggaatcctttcttccccaaaaacttc
ctcactgtgggggactggagggctcgaatttggtccgaggacatcaaggagtcgtccatc
atgtggacgaaataccagatgtcgtgcctgacagatgcctgctggagtcctattagaccc
tctgtcttttttaccgtgaagatggatggcgtgctggacatctgggacgtcttgtttaag
cagaccgagcccacgctgagtgtgaaggtgtgtgatgaagctctgtatagcttgcgtctg
catgagagcggacgcctggtggcttgcggttctcagcagggttctgctacaatactggag
atctgctccggactgtccaaccttcagaagaatgaaaaaagtcttatggctgaaatgtta
gagcgcgaggccaaacgcgagaagatcctggaagctcgtcagaaagaactacgcctgaag
gaaaggagtcgctccgagcagagccgggaggacgaagcgggccgagacgcggccgagcgt
gaggagactcccgagcaacttattgccagagccgagcaggacttcttcagcatggtggaa
gccgagaagaggaggaggcgggaaagggaggagattggctcatag
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