Syngnathus scovelli (Gulf pipefish): 125980197
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Entry
125980197 CDS
T08785
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03015
mRNA surveillance pathway
sscv04261
Adrenergic signaling in cardiomyocytes
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125980197
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125980197
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125980197
03036 Chromosome and associated proteins [BR:
sscv03036
]
125980197
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125980197
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125980197
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125980197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
InlK_D2
VPS11_N
Motif
Other DBs
NCBI-GeneID:
125980197
NCBI-ProteinID:
XP_049595278
LinkDB
All DBs
Position
13:complement(13538684..13547009)
Genome browser
AA seq
445 aa
AA seq
DB search
MAGAGGDMQWCFSQVKGAIDDDVAEADIISTVEFNHTGELLATGDKGGRVVIFQQEIENK
SMPQFRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLW
KISERDRRPEGYNLKEEDGRYKDPNTITSLRVPVLIPMDLMVEASPRRVFANAHTYHINS
ISVNSDNETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPHQCNTF
VYSSSKGTIRLCDMRISALCDKHSKLFEEPEDPSNRSFFSEIISSISDVKFSHNGRYMMT
RDYLSVKIWDLNMENRPVETYQVHEHLRSKLCSLYENDCIFDKFECCWNGNDSVVMTGSY
NNFFRMFDRSQRRDVTLEASRENIKPMQVLKPRKVCVGGKRKKDEISVDSLDFNKKILHT
AWHPQDNIIAVATTNNLYIFQDKVN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctggaggtgacatgcagtggtgcttctctcaggtgaaaggagccattgat
gatgatgtggctgaagccgacatcatctccacggttgagttcaaccacacaggtgagctg
ctggccacgggtgacaaaggtgggcgcgtggttattttccagcaggaaatagagaacaag
agtatgcctcagtttcggagcgagtacaacgtttatagcactttccaaagtcacgagccc
gagtttgactacttgaagagtttggagattgaagaaaagatcaacaagattcgctggctc
cctcagaagaacgccgctcagttcctgctgtcaactaacgataaaaccatcaagttgtgg
aaaatcagcgaacgagaccggcgaccggagggctacaatcttaaagaagaagatggacgc
tacaaggatcccaacactatcacctcattacgggtgccagttttgatacccatggacctc
atggtggaagccagcccacgcagggtgttcgccaacgcacacacctaccacatcaactcc
atctcggtcaacagcgacaacgagacctacctgtcggccgacgacctccgcatcaacctt
tggcacctggagatcaccgaccgcagcttcaatattgttgacatcaagccagccaacatg
gaggagctgacggaggtgatcacagcagccgagttccatcctcatcagtgcaacactttt
gtctacagcagcagcaaaggcactatccgtctgtgcgacatgaggatctccgcgctctgt
gacaagcactccaaactttttgaagagccagaagatcccagtaatcgctctttcttctcc
gagattatttcgtcaatctcggacgtgaaatttagtcacaacggacgctacatgatgacc
agggactatttgtctgtgaagatttgggacttgaacatggagaacaggccggtggagact
tatcaggtccacgagcacctgaggagcaaactgtgctcgctctacgaaaacgactgcatc
ttcgacaagtttgaatgttgctggaatggcaatgacagcgtggtgatgaccggctcgtac
aacaatttcttccggatgttcgaccggagccagcggcgcgacgtcactttggaggcctcc
cgcgagaacatcaagcccatgcaggtcctgaaaccccgcaaggtgtgcgtggggggcaag
cgcaagaaggacgagatcagcgtggacagtttggactttaacaagaagatcctgcacacc
gcctggcatccccaggacaacatcatcgcggtagccacgaccaacaacctctacatattc
caggataaagtcaattaa
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