Syngnathus scovelli (Gulf pipefish): 125980206
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Entry
125980206 CDS
T08785
Symbol
gtf3c5
Name
(RefSeq) general transcription factor 3C polypeptide 5 isoform X1
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125980206 (gtf3c5)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
125980206 (gtf3c5)
TFIIIC, fungi type
125980206 (gtf3c5)
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Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
125980206
NCBI-ProteinID:
XP_049595295
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All DBs
Position
13:13639651..13643210
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AA seq
527 aa
AA seq
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MADSRDINSGFTLKELSFSDSNNEDIVPGSSSTLELRDNKLVCVEYPGLVSNVDKMLETL
GGQRNISETFSQPNLRLELRYRPQDPFCHSICGNRFSSSNLLLRVRRRVRKRDSKVAEIN
MEILGVIGTTYKFQGMADYQCLAVHSQNGEHTSLYNKIILRKTEKEEYFKQPMPLFLPPT
IFSRLDTPVDYFYRADVFNKQKADNLQNKTNFIGLNRPRRPHNAIFLTFADPEVPTETQE
TARIKWKTMATTEYDLQCEEKLVAMFESRPIWSRNAVKANLNIHPEKLKRLLPVVAYYMV
TGPWRTLWVRFGYDPRKTVESKIYQMLNYRMRCSTKNVYIVSELLVKPKRSSLNYTLPIA
FNKTGPTPASVSELRNQEASGTSKDPVPISYQLEDSAYIFREGMLPPNRQMFYQLCDLHV
PSIQEIIMQNNNPQVCDERDGWCPMGTTDKLRDIISSLVKKVVREHKSPALEKHSLQPKR
TAQSSKVDSEDDEDDDDYEHEEGEGDEVYQPSEGSENEMETEILDYM
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctagagatataaattcggggttcacgctgaaagaactttcgttttccgat
tcgaataatgaggacatagtgcccggcagctcgtcaacgttggagttgcgcgataacaaa
ctggtatgcgtggagtatccaggcttagtttccaacgtggacaagatgctagagacgctt
ggcggtcaaagaaatatttcggaaaccttcagtcaaccaaatctgcgactagagctgcgc
taccgaccccaggaccctttctgtcattctatatgcggtaaccgcttctcatccagcaat
cttctcctccgtgtgcgaaggagagtccgaaaaagagattccaaagttgctgagatcaac
atggagatacttggagtcatcgggacgacgtacaaatttcaagggatggcagattatcag
tgccttgctgtgcattcccaaaatggagaacacacatctttgtacaacaaaatcatcctt
cggaaaaccgagaaggaagagtattttaagcagcccatgccgctcttccttcccccgacc
atcttctcgcgtctcgacacaccagttgattatttctaccgagctgatgtttttaacaag
cagaaagctgataatctccagaacaagacaaatttcattggattgaacagaccccgtcgg
ccccataacgccattttcctcactttcgccgatcccgaggttcccaccgaaactcaggag
acggctcggatcaaatggaaaacaatggccacgactgagtatgacctccaatgtgaggaa
aaactagtggcgatgtttgagagccggcccatctggtcccgaaatgccgtcaaggccaac
cttaacatccacccggaaaaactcaaaagactcctgccggtcgtggcatattacatggtg
accggaccatggagaactctgtgggtgagatttggctacgaccctcgaaagacagtcgag
tccaagatttaccagatgctcaactacaggatgcgctgtagcaccaaaaacgtttatatc
gtatctgagctactggtgaagcccaagaggagttccctgaactacacgctacccatagca
ttcaacaagaccggtccaactccggccagtgtgtcagaacttcgaaatcaggaggcttcg
ggcactagtaaagatccagtgccaatctcttatcaattagaggactctgcgtatattttc
cgagagggcatgctaccacctaaccggcagatgttttaccagctgtgtgacttgcacgtg
ccaagcatccaggaaatcatcatgcagaataacaacccacaagtgtgcgatgagcgtgac
ggctggtgtcccatgggaacaacggataagctgcgggacatcatctcgtctctggttaag
aaggttgtgcgagagcacaaatcgcctgcattggaaaagcactccttgcaaccgaaacgg
acggcacagagttcaaaagtcgacagcgaggatgatgaagatgatgatgattatgaacat
gaggaaggtgaaggggatgaagtctatcagccatcagagggaagtgaaaatgagatggag
actgaaatattggattatatgtga
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