Syngnathus scovelli (Gulf pipefish): 125980410
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Entry
125980410 CDS
T08785
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125980410
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
125980410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF
EGF_3
hEGF
EGF_2
EGF_DL_JAG
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
125980410
NCBI-ProteinID:
XP_049595407
LinkDB
All DBs
Position
14:10668369..10719224
Genome browser
AA seq
1975 aa
AA seq
DB search
MERIRLAVVVLLAVTALVHGGGDGHTDTLTGGKRRGPSAGLMEGAERSPSETTHTRGDDG
LPSKAVPIRSARHPRSVTPPQPRARVNRRQNSKSSTRRLVGPNVCGGQQCCSGWAVAPGT
NRCIKPDCQPPCQNRGSCSRPHTCVCRSGFQGSRCEEVAPEQVYIHDRGSLRRVQPGSNP
FHRDQPRRRQESTKVQTPRPATTRQPVRSATQVRRGPPESSPQLTGTSRTVKRYPSSSGP
ITSNALPAGNAHANEHGNSHGQRHGHDYFHRPTSHNQFNNVLSPAGANLTSNLDRIKIVF
TPTTCRRVCGNGRCYNSCEKGDVTTVYSETSQQLQQQQQPKTSGFRLFFCQIPCRNGGRC
IGRDQCWCPSNSTGKFCHLPAQPHAKPAVKDSRNSGHKSPSHSTYTLPLSNQQASLHPSL
VKVHIQHPPEAEVHVHQVARVQPGQRLPATEGAHSVQQRSQPGNGHELGGRRVHTGVDNY
ARTQHRQNGHVGRCFQETVDGKCGNPLPGLTKQDDCCGSVGASWGLNKCHKCPSKPAYAV
IANGQVECPVGYKRMNATHCQDINECLLPGICKNAECLNTKGSYRCTCKPGFMLDPARSH
CVSDKAVSDQKAFCYRSVSAGACSLPLSLHITKQICCCSRVGKAWGDGCDRCPLPESDHF
KEICPVGHGYTYSRSDVQISLQQLGEDDLQSTGLSWEEQNPTYPQLPSSQPQYPIYPQSP
QIPQWPEYPELPRHPINPQQPHHPFIPDRETSRQPEDVEIQRPVSSSFYKGVNLTDMCLN
MCLFFQPAVVTDSPSKYPEVSPNSPAKPDPKETAHTDSGSFDKCATTPFICGHGKCMPVQ
SGYTCHCEVGFQLNALQTTCIDVNECEDEPCDGKGICSNSYGSYSCQCFSGYSQAITQNR
KFCQDIDECSMPNKCQSGRCINTEGSYTCECDSGFAKSWRDQCEDVDECQDPSTCPDGGC
VNTVGSFHCRVCSTGFRPISDGCVDINECLNQNICGHGRCVNSEGSYRCNCFQGYKLALD
NVCQDVNECLLPGMCLHGHCVNLEGTHRCTCNHGYQVTPDDKTCEDIDECASGKKCPEGI
CVNTPGSFTCQSCNPGFEPSEDGLRCEDVDECSQGDWCLGGVCANTPGSYTCTRCKAGYK
VTPDRRRCEDIDECQSLSTCSNGICLNSEGSYTCENCPTGYTVSYDGELCEDINECALPT
TCPRGTCTNTEGSYTCVSCQPGYRISKDRQQCDDVDECLVANVCPDQLCSNTPGSYTCTS
CSSGLQLSQDGDGCEDIDECQTPGVCPAGFCINTEGSYSCLTFDPGFTPAPVGRACEDGN
ECENTSRCVGGQCTNNVGSFGFTCPDGLEVIDGTSCRDVDECSKDNICTRGQCLNTEGSF
MCLCEAGFKYSEETADCEDQNECKEYGSSVCGTWRCENTIGSYRCFMGCQPGLEGEEATD
CDVDECLNETICESHGFCENTDGSYRCECDLGYTNPPGDTTKCVDVNECEMSLALCGEAL
CENFDGSFLCICPNDNEEFDPIASRCRSLAVTEPKGSAPAAPSSEERKECYYNLNDANFC
DNVLSRNSTKQECCCTVGAGWGDNCEVHGCPAPGGDDYNQLCPHGSGSIPLPASSTQSLA
EQRLYIDANECEMFGPDICKNGQCVNLFSTYTCYCRSGFYYDNVRLECVDYDECEFGNAC
IDGACVNTAGSFNCFCSPPLMLDATLRRCVSVNTTEESVESNLDVHMDICWQRLEGGDTC
VGPLQGRRTTYTECCCLYGIAWSGQCAFCPRKDSEDYAVMCNLPLRGGSDSLRERPSYEY
GVDGPEDPVEPFVPPYWDNYGGPAGPYDVPASVPLFNDNDYNVRQPPARVPVHRPREHQP
RPVDSFNERYDAFEGLQAEECGILNGCENGRCVRVREGYTCDCFDGYELDLNKMACIDIN
ECEDISDKVPLCQNGHCSNTEGSYKCTCLPGFVASDKPHKCIPAIPAADLKQTGN
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaatccgtttggctgttgtggtgcttttggccgtgacagcgcttgttcacgga
ggtggtgatggccacacggacaccttgacaggtgggaagagaagaggtccaagtgccggg
ctgatggaaggtgctgaaagaagcccatcggagaccacccacacccggggggatgacggg
ctcccgtcaaaggctgtcccgatcaggagtgctcgacacccccgcagcgtgacccccccg
cagcccagagccagagtgaatcgtcggcagaacagcaagtccagcaccaggagacttgtc
gggccgaacgtgtgcggcggtcaacaatgctgctccggctgggccgtggcaccgggaacc
aaccgctgcatcaaacccgactgccagccgccctgccagaaccgcggctcctgcagccgg
ccgcatacctgcgtgtgccgctcaggtttccaggggtcccgttgtgaggaggtggccccc
gaacaggtgtacatccacgacagagggtctctaaggcgtgtgcaaccgggcagcaaccct
ttccacagagaccaaccgcgaagacgccaagaaagcaccaaggtccaaaccccgagacct
gcgaccaccaggcaaccagtccgctctgcgacccaagtgagacggggaccccctgaatcc
tcccctcagctgacggggacctcccgtaccgtcaagcgttatccgtcatcctctgggccc
atcacctccaacgcgctgcccgccggcaacgcccacgcaaatgagcacgggaactcccac
ggacaaagacacgggcatgactactttcacaggccgaccagtcacaaccaattcaacaat
gtgctgtcgccagcaggagctaacctcacttctaacttggaccgaatcaagattgttttc
acgcccaccacgtgccgccgggtgtgcggaaacggacgctgctacaatagttgcgagaaa
ggagacgtgaccaccgtgtacagtgagacttcgcagcaacttcagcagcagcaacagccg
aagacgtcgggctttcgactcttcttttgtcagatcccctgtcgaaacggaggccgttgc
attggcagggaccaatgttggtgtccgtccaactctaccgggaagttttgtcacttgccg
gctcagcctcacgcgaaacccgccgtcaaggactccagaaactctggacacaaatctcct
tcccattccacgtacacgctgccgctttccaatcaacaagcatcacttcacccatcgttg
gttaaggtccacatccagcacccgccggaagctgaggtccacgtccaccaagtggctcgg
gtccaacctggccagcggttgcctgccaccgagggggctcactccgtccagcaacgttct
cagcctggcaacggccacgagctcggcggcagacgcgtacacaccggcgtggacaattac
gctagaacacagcatcgtcagaatggacatgtgggaaggtgcttccaggagacggttgac
ggaaagtgtggaaatcctctgccaggcttaaccaagcaagatgactgctgtggcagcgtg
ggagcctcctggggtcttaacaagtgccacaagtgtccaagcaaaccagcgtacgcggtg
attgcaaacgggcaagtggaatgtcctgtcggatataaaaggatgaacgcgacgcactgt
caagatatcaatgagtgcctgctgccgggaatctgcaagaatgcagagtgtctcaacacc
aaaggaagctacaggtgcacgtgtaaacctggtttcatgttggaccctgccagaagtcat
tgcgtctctgacaaggccgtttcagaccagaaggcgttttgctacagatcggtgtcagca
ggagcatgttcgctgccactttctctacacatcaccaagcagatctgctgctgcagccgc
gtgggcaaagcctggggagatggctgcgatcgctgccctttacccgaatctgatcatttc
aaggagatctgcccagtcggtcacggatacacctactcccgctccgatgttcagatttcc
ttgcagcagctgggcgaggatgatcttcagagtaccggtttgtcctgggaggagcagaac
ccaacatatcctcagctgccatcctcccagcctcaatatcccatttacccacaaagtcca
caaataccccagtggcccgagtacccagagttaccccggcacccgatcaatccacagcag
cctcaccatccatttatcccagacagagaaacatctcgacagcctgaagatgtggaaatt
caaagaccggtaagttcttccttttataaaggtgttaatttaaccgacatgtgtctgaat
atgtgtttgttttttcagccagctgttgtgacggactcgccatccaaatatccagaagtt
tctccaaactcaccagccaagcctgatccaaaggaaacagcccacacagactcaggaagt
tttgacaagtgtgcaaccactccattcatttgtggccatgggaaatgcatgcctgtgcag
agtggctacacttgccattgcgaagtaggatttcaactcaatgctctgcagaccacctgt
atagatgtgaatgagtgtgaggatgagccatgtgacggaaaagggatttgttcgaacagc
tatggctcctatagttgtcaatgcttcagcggatacagccaagccatcactcaaaacaga
aagttctgtcaagatattgatgagtgcagcatgcccaacaaatgccagagtggccgctgc
atcaacacggaaggatcttatacttgtgaatgtgacagcggttttgccaagtcctggaga
gaccaatgcgaagatgtggatgagtgtcaggatccaagcacttgtcctgatggtggttgt
gttaatactgtgggctcctttcactgccgggtttgcagcaccggcttcaggccaatcagc
gatggatgtgtagatataaacgaatgcttgaaccaaaacatatgcggccacggaaggtgt
gtcaacagcgagggctcctataggtgcaactgtttccaaggatacaaactcgcgctggac
aacgtatgccaagatgtgaatgagtgtctgcttccggggatgtgccttcatggacattgc
gtgaatctggagggtacccacagatgtacttgtaaccatggttaccaagtcaccccagac
gataaaacctgtgaagatatcgatgagtgcgcatctggtaaaaagtgtcctgaaggaatt
tgcgtcaacacgcccggttcctttacatgccagagttgtaatcctggttttgaaccatca
gaagatgggctgagatgtgaagatgtggacgagtgttctcaaggcgactggtgtctcggc
ggcgtgtgcgccaacacgcctggctcgtacacctgcaccaggtgtaaagcgggttacaaa
gtgactccagatcgacgccgatgtgaagatattgacgaatgccagtcgttgtctacctgc
tccaatggcatctgtctcaactccgagggttcttacacctgcgagaattgcccgacgggc
tacacggtgtcgtatgacggagaactttgtgaagatattaacgagtgcgcgctgcccacg
acgtgcccccggggaacatgtacaaacacagaaggttcctacacatgtgtcagctgtcag
cctgggtacagaatctccaaggatagacagcagtgcgatgatgtggatgaatgcttggtc
gctaacgtgtgcccggaccagctgtgctcaaacactcccggatcttatacctgcacgagc
tgcagctccggcttgcagctgtctcaggacggtgatggttgtgaggatatcgacgagtgc
cagacaccaggggtgtgtccggcgggtttttgcatcaacacggagggctcttactcatgt
ctgacctttgaccccggctttaccccggcacccgtcggccgcgcgtgcgaagatggaaac
gaatgtgagaacacaagtcggtgcgtgggaggtcagtgcaccaacaacgttggatctttc
ggtttcacgtgccctgacggcctggaggtaatcgatgggacctcctgcagagatgtggac
gagtgtagcaaagacaacatatgcactcggggacaatgcctcaatactgagggaagtttc
atgtgcttatgcgaagccggtttcaagtatagcgaggagacggctgactgtgaagatcag
aatgagtgtaaggagtatggaagctccgtgtgcgggacatggcgctgtgagaatactatc
gggtcgtaccgctgcttcatgggttgccagcctggccttgagggagaagaggccacagac
tgcgatgtggacgaatgcctcaatgagaccatttgtgagagccacggtttttgcgaaaac
accgacgggtcctaccgctgcgagtgtgatctgggctacaccaaccctcctggagatacc
accaaatgtgtcgacgtgaatgagtgcgagatgagcttggcgctgtgcggggaggccctg
tgtgagaacttcgacggcagcttcctgtgcatctgccccaacgacaatgaggaatttgat
cccatcgccagccgctgccgctccctggctgtcaccgagccaaaaggctccgcccccgca
gccccctcgtcggaggagagaaaggaatgctactacaatttaaacgacgccaacttctgc
gacaacgtcttatcccgtaacagcaccaagcaggagtgctgctgcaccgtcggcgccggc
tggggcgacaactgcgaggtccacggctgtcccgctccaggaggagatgattataaccag
ttgtgccctcacggcagcggctccatccccctgccagcttcgtccactcaaagtctggca
gaacaacgactctacatagatgcaaatgaatgtgaaatgtttggacctgacatttgtaag
aacggacagtgtgtcaatctcttctccacctatacctgctactgccgctcgggtttctac
tacgacaacgtccgactggagtgcgtcgattacgacgaatgtgaattcggaaacgcctgt
attgatggagcgtgcgtgaacacggcgggctcgttcaactgtttctgcagtccgccgtta
atgctggacgccacgctgcggcgttgcgtaagcgtcaacacaacagaagaatctgtggag
tccaacctggacgtgcacatggacatctgctggcagcgtttggaaggcggcgacacgtgt
gtcggacccctgcagggtcgcagaacgacctacaccgagtgttgctgcctgtatggaatt
gcatggagtggacagtgtgccttttgtccaaggaaagactctgaggactacgccgtcatg
tgcaacctccctcttagaggaggttcagacagtctacgagagcggccgagctacgagtac
ggcgtggacgggcctgaggatcccgtggagccttttgttccgccctactgggacaactac
ggcggcccggcgggaccgtacgacgttcccgcgagcgtccccttgttcaacgataacgat
tacaacgtccgacagccgccagcgcgagtccccgttcatcgacctcgtgagcatcaacct
cggccggtggattcctttaatgagcgctacgatgccttcgaaggtctccaagcggaagaa
tgcgggatcctgaacggttgtgaaaacggacgatgcgttcgcgtgagggaaggctacacc
tgcgactgcttcgacggttacgagttggacctaaacaagatggcctgcatagatatcaac
gaatgcgaggacatcagcgacaaggtgccgttgtgtcagaacggccactgcagcaacaca
gaagggtcgtacaaatgcacctgcttgcccggcttcgtggcctccgacaagccccacaaa
tgcatcccggctatcccggcggcagacctcaagcaaacggggaactga
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