Syngnathus scovelli (Gulf pipefish): 125980414
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Entry
125980414 CDS
T08785
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1 isoform X1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125980414 (exd1)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125980414 (exd1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
125980414
NCBI-ProteinID:
XP_049595414
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Position
14:10768600..10784837
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AA seq
442 aa
AA seq
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MADYSFSNIFQGKRIKITLKSSFCVGVVQRIGSSKTVTLTNVVYGDNGRELPGSRLFFGH
EFVNVEFVNDEDKKHGNIPEDHLKLSEFQPFKNFYHAEDDDEYIKFEVINAFHEKFGPAM
MQIKKQHVVGVGADGVDMYKHGRLCWLQIATKHKVYLFDILLLGEKAFKNGLTMILESKR
ILKVVHDCRAIAGCLMTQHGVKMTNVFDTQVADVMCFHSETGGFFPHKVSTLHELVSRHL
KLPSSHLSVLETKSQFTEEESKLWYNRPCPLPLLNVMALSVIHLQPLRMALLDCLLTDYM
ALVDVYLSNSQYPNEDLESINMEKVFDLPDELRMLDQMHCERRECAVKRYPTTDKGLLIR
SGPRTETPLQTSPAPEQHESTEPTVEPQSPTPPLEADENAFPTFVDVATPDPVPDTTSDQ
VSEMSFGGGVKDLASLLMEVMG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcagattattcattctcaaatatattccaaggcaaacgtattaaaattactcttaaa
tcgtcgttttgcgtcggcgttgtgcaacgaatcggctctagcaaaacggtgaccctcacg
aacgtcgtgtatggcgataatggccgcgaacttcccggaagtagattattcttcggccat
gagtttgtgaatgtggagtttgtcaatgacgaggacaaaaagcatggaaatattcctgaa
gaccacttgaagctgtctgaattccagccattcaagaatttttaccacgctgaggatgat
gatgaatacatcaaatttgaagttattaatgcctttcatgagaaatttggacccgctatg
atgcaaattaagaagcagcatgtggttggcgttggggctgatggggtggacatgtacaag
catggccgactgtgttggcttcagattgccaccaaacataaggtttatctctttgacatt
ctcttgcttggagagaaagcctttaaaaacggtctgactatgattctcgagagtaagcgc
atactgaaggtcgttcatgactgcagagcgattgccgggtgtctgatgacacaacacggc
gtgaagatgacgaatgtctttgacactcaggtggcagatgtcatgtgctttcactctgag
actggaggattctttcctcacaaagtaagcactcttcatgagctggtgagtcgccacctg
aagttgccctcctcccacctctccgtcttagagaccaagtcccagtttaccgaggaggaa
agcaagttgtggtacaaccgtccatgtcctttaccattgctaaacgtgatggcgctgtct
gtgatccacttgcaacctctcagaatggcactgctggattgtcttctcacggactacatg
gctttagtggatgtctacctctcaaatagccagtatccaaatgaagatttggaaagcatc
aatatggagaaagtgtttgacttgccggatgagctcaggatgttggatcagatgcactgc
gagcgtcgtgagtgtgccgtcaaacgctaccccactacagacaaaggtctgctgatccgt
tccggtcctcgaacggagaccccactccaaacctcacctgcgccagagcaacacgaatcc
acagagcctaccgtggaaccgcaatcgccgacaccaccgttggaagccgatgaaaacgcc
ttccccacttttgtggatgtggccactccagatccggtcccagacaccacatcagaccaa
gtgagcgaaatgtctttcggtggtggagttaaagatttagcatcgcttttgatggaagtc
atgggttga
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