Syngnathus scovelli (Gulf pipefish): 125980420
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Entry
125980420 CDS
T08785
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125980420
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125980420
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125980420
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125980420
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125980420
Membrane trafficking [BR:
sscv04131
]
Autophagy
Other autophagy associated proteins
Others
125980420
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
125980420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
ANCHR-like_BBOX
zf-B_box
GBP
AIG1
MMR_HSR1
DUF6079
Motif
Other DBs
NCBI-GeneID:
125980420
NCBI-ProteinID:
XP_049595431
LinkDB
All DBs
Position
14:10802468..10809332
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AA seq
782 aa
AA seq
DB search
MSGHGSSSSEKGVNTSLTCQENYACGGLEEAAFECEECRTLQCVRCDLELHSQDRLQNHR
RLQISSGYVPYCDNCKGGDNGKRSRSVVRCQNCKVNMCQECQKRTHGGGNKKKHQLVSYL
TPPKHTELKSVEPSVQPVLQVTDENKSLRAKVLETVSSFLLVDENEEMQIKDEAAFVKNL
NCGAGQLLKVVSIFGNTGEGKSHTLNHTFFMGREVFKTSPTQESCTVGVWAAFDPFHNVV
VIDTEGLLGNSSKQGQRTRLLLKVLAISDLIIYRTHADRLHDDLFKFLGDASEAYLKHFT
KELKAATARCGLDVPLSSLGPAVIIFHETVHTKLLGTDKSHESVDRLLLERFKKVSRFPE
AFSSVQYWGTQTLTPPTDFCGLQNKLEQLLDSNATRSPRTPVVIFKALLALSERFSGEIG
DELVAHSCFFPDEYFTCSSLCLSCGSGCKNSMNHLGEGVCHEAKHRCRYSIQHDNRIYTC
KACYEGGKEVVVIPKTSASSDSPWMGLAKYAWSGYVIECPHCGVIYRSRQYWYGNQDPVD
TVVRTEIQHVWPGSEGFLKDNSNAAQRLLDGVNLVAQSVSELGVKPAKAVTSWLTDQIAP
TYWKPNSLILLCHKCQAVFLENDTKHHCRACGEGFCDGCSSKAAPVPERGWGLGPVRVCD
VCFEQRASHAAHEEDEEEGGTLARKVGEAVSNTIGVVVTAIDIPLGLVKDAARPAYWVPD
QDILSCHICRRQFTAKLSKHHCRACGQGVCDDCSPERRAVPSRGWDHPVRVCTGCNQKAG
EL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggcatggctcatcatcttcagaaaagggagtcaatacaagtctaacatgtcaa
gaaaattacgcctgtggtggcttggaggaggccgcctttgagtgtgaagagtgcaggacc
ttgcagtgtgttcgttgcgacctcgagctccacagtcaggaccgtctccagaaccacagg
cggctccagataagctcaggctatgtcccttactgtgacaattgcaaaggaggggacaat
ggcaaacgtagcaggtcggtggtccgctgccagaactgtaaagtaaatatgtgccaagaa
tgtcaaaagcgaactcacggcggagggaacaagaagaaacaccagcttgtatcgtatcta
acgccaccaaaacacacggagctcaagtctgtggaaccttctgttcagcctgtcctccaa
gtcactgatgagaataagtctctgcgggcaaaagtcctggaaactgtgtccagttttctt
ctcgttgatgaaaatgaggaaatgcagataaaagatgaggctgcatttgtgaagaacctg
aactgtggcgccggccagctcctaaaagtggtctccatctttggtaacaccggagagggc
aaatcccataccctcaaccacaccttcttcatgggcagggaagtgttcaaaacttctccc
acccaagagtcctgcacagtgggcgtgtgggcggcctttgaccccttccataacgtggtg
gtcatcgatacagaggggctgctggggaacagctccaaacagggccagagaacccggctc
ttgctcaaggtgcttgccatctctgacctcatcatctaccggacccacgccgaccgcctc
cacgacgaccttttcaaatttctcggggacgcctccgaggcctacttgaagcatttcacc
aaggaactgaaggccgccacggctcgctgcggtctggatgttcctctctcctctttgggt
cctgctgtgattatctttcacgaaaccgtccacactaagctcctcggcacagataaatca
cacgaatcagttgatcggctgctgttggagcgttttaaaaaggtctcccgtttcccggag
gccttcagttctgttcagtactggggcacgcagactctcactccacccactgatttctgc
ggcctgcagaataaactggagcagctcttggacagcaacgccacacgttctccacgcacc
cctgtggtcatcttcaaagctctgctggccttaagtgagcgcttcagtggggaaatcgga
gacgagctggtagcccacagttgcttcttccctgatgagtacttcacttgctccagcttg
tgcctcagttgtggatccggttgcaaaaacagcatgaaccacctgggcgaaggcgtctgc
cacgaggcaaagcatcgttgtcgctattctattcagcatgataatcgcatttacacctgt
aaggcttgttacgaaggaggcaaagaagtcgtcgtcatcccgaagacttcagcctcctca
gactctccttggatgggcctcgccaaatacgcctggtccgggtatgttatcgaatgcccc
cactgtggagtgatctatcggagccgtcagtattggtacgggaaccaggacccagtggac
accgttgtccgtaccgaaatccagcacgtttggccagggtcggagggctttttaaaggac
aatagcaacgcagcacagcgtcttttggatggcgtgaacctggtggcccagtctgtgtcg
gagctcggcgtcaagcccgctaaggccgtcacctcctggctgacggaccagatcgccccc
acctactggaaacccaattcccttatcttgctgtgccataagtgtcaagcggtcttcctg
gagaacgacaccaagcatcactgccgtgcctgtggggagggcttctgcgacggctgctct
tccaaagcggccccggtccccgaacggggatggggtctcggccctgtcagggtgtgcgac
gtgtgctttgagcagagagcctcacacgcagctcacgaggaggacgaggaagaaggcgga
acgcttgcgaggaaggttggcgaggcggtgagcaacaccatcggggttgttgtgaccgct
attgacatcccgcttggcctggtaaaagacgccgcccgtcccgcctactgggtgcccgac
caggacatcctctcttgccacatctgccgacgccaattcaccgccaagctgtccaagcac
cactgccgcgcctgcggccaaggcgtgtgcgacgactgctcgcctgagcgtcgcgccgtg
ccgtcacgcggctgggatcaccccgtgcgcgtgtgcaccggctgcaaccaaaaagccgga
gagctctaa
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