Syngnathus scovelli (Gulf pipefish): 125980455
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Entry
125980455 CDS
T08785
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03030
DNA replication
sscv03410
Base excision repair
sscv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125980455 (pole2)
03410 Base excision repair
125980455 (pole2)
03420 Nucleotide excision repair
125980455 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sscv03032
]
125980455 (pole2)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125980455 (pole2)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125980455 (pole2)
DNA replication proteins [BR:
sscv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
125980455 (pole2)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
125980455 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
125980455
NCBI-ProteinID:
XP_049595515
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All DBs
Position
14:complement(11234145..11238006)
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AA seq
529 aa
AA seq
DB search
MMDATRRIKSRVCADFKMRGFILRPEATKCLVESLLSVSPTELDDIIERVLDAVEKQPLT
SSMIELSVVENAVQDCFQSCDETMSNVFNIIGAFDVPRYIYNPERKKFVPLSMTNHPTPG
LCGIARDKAELFRERYTILLQRTRRHELFTPPVIGAAVVHNQNKFQLKTIEALLGSTATL
GGVIVLGMITQLREGKFYLEDPTGTVELNMSKAQFHNGLYTEYSFVLAEGWYEDSVFHVN
GFGTPPIEPSSATRAYFGNINFFGGPSTTSVKASVKLKQLEEENDDAMFVLVSDVWLDNA
EVMEKLNLMFSGYAAMPPTCFIFCGNFSSVPYGKGHVKSLKESLKVLADSICAHPNILNN
SRFVFVPGPEDPGPGTILPRPPLANHITEEFRQRVPFCAFTTNPCRIQYCSQEIIVIRED
LVNKMCRNCVGLPNSNLDIPNHFVRSILSQAHLAPLPLYVTPVFWAYDYALRVYPVPDMV
VFADKYDPFNVTHSDCLCVNPGSFLRSGFTFKVYYPANKTIEDSKLQGL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgccacccggagaataaaatccagagtttgtgctgacttcaaaatgcgggga
tttattctccgacctgaggccaccaagtgcctggtagagtccctgttgtctgtcagtccc
actgagctggatgacatcatcgaaagagtgctggatgctgtggagaagcaaccattaact
tcaagcatgatcgagctatcggtggtggaaaatgccgtgcaggattgctttcaatcctgc
gatgaaaccatgagtaacgttttcaacatcatcggcgcctttgacgtgcccagatacatt
tacaacccggagcggaagaagtttgttcccctaagtatgaccaaccatccaactccgggc
ctgtgcggcatcgccagagataaggcggaactttttcgggagcgctacacaatcttactg
cagcgcacacgtcgacacgagctgttcaccccgcctgtcataggagctgctgtagtgcac
aatcaaaataaatttcagctgaagaccattgaagctttgctcggcagcacggccacactg
gggggcgtgatcgttctcggaatgatcacacaactaagagaggggaaattctacctggag
gatccaactgggactgtagagctcaatatgtccaaggcacagtttcataatggcctttac
actgaatacagtttcgtattggctgagggctggtacgaggactcggttttccacgtcaat
ggttttggcactccgcccatagaaccttcatcagccacacgggcgtactttggcaacatc
aactttttcggcggtccgtccactacgtcggtgaaagcgtcggtcaagctcaagcaactg
gaggaggaaaacgacgacgccatgtttgtcctggtttccgacgtgtggctggacaacgcg
gaagtgatggagaagctcaacctcatgttctcaggttacgcggcaatgcctcccacgtgt
ttcatcttttgtggaaacttctcttctgttccgtatggaaaaggtcacgtcaaatcactc
aaggagtcgctgaaggtgttagctgacagcatatgtgcgcatcctaacatactcaacaat
agtcgttttgtgtttgttcctggccctgaagatccaggcccgggcaccatcctaccacga
cctccgctggcgaatcacatcactgaggagttcagacaaagggttcctttttgcgcgttc
accaccaacccgtgcaggatccagtactgcagtcaggagatcattgtcatccgtgaggac
ttggtcaacaaaatgtgcaggaattgtgtgggcttgcccaacagcaacctggatattcct
aatcattttgtccggagcattctgtcgcaggctcacctggcgccattgcctctttacgtc
actcccgtgttttgggcctacgactacgccctgcgcgtgtaccccgttcccgacatggtg
gtctttgccgacaagtacgaccccttcaacgtcacacactccgactgcctttgcgtcaat
ccgggctctttcctaagaagtggttttacatttaaagtttactatccagccaacaaaacc
attgaggacagcaaacttcaaggactataa
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