Syngnathus scovelli (Gulf pipefish): 125980473
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Entry
125980473 CDS
T08785
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04020
Calcium signaling pathway
sscv04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125980473 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125980473 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sscv04030
]
125980473 (ptafr)
G protein-coupled receptors [BR:
sscv04030
]
Rhodopsin family
Others
Platelet activating factor
125980473 (ptafr)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Serpentine_r_xa
7tm_4
Motif
Other DBs
NCBI-GeneID:
125980473
NCBI-ProteinID:
XP_049595539
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Position
14:11339254..11342663
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AA seq
395 aa
AA seq
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MQETMIEMEIPPTEIPARVTTLRFTASNDSNFLDSPFRYQLFPAAYGIIFIVGLFANIYV
LFVLRCLRDAKAMGEIRIYMTNLTIADLLFVCALPFWIGYYSRQGTWVYKDFLCRLTGSL
FFINTYCSILFLCAISVNRYWAVTRPLDAASSDHRRRGIVVCVVIWLATVSMAIPFLANP
GTNQDGNVTRCFEGYHNGDDSSKRAVAATHFAIIGLFSVVFALVVVCNLLIAQALFSQNA
PQSELKSGTILSRKSTMTISSRRPTGVKRRAVQMLMAVVGVFVLCFLPHHVVQGFWTLAV
LKIQKGWGHVDWDSETVQMLNDAHQITLLLMGLNCILDPVVYCFATRKFRRFIMAHIKRL
AKGEGCSHTVTSQISLDSRHQSQRFPDEVIQPDIN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaccatgatagaaatggagatcccccctacagaaatcccagcgagagtcacc
actctgcgctttacagctagcaatgactccaacttcctggactcgccttttcgttatcag
cttttccccgccgcctatggcatcatcttcatcgtgggcctctttgccaacatttatgtg
ctctttgtgctgcgctgccttcgggacgctaaagccatgggggaaattcgcatctatatg
accaacctgaccatcgccgatctcctttttgtttgcgccctccccttctggatcggctat
tacagccgccaaggcacgtgggtctacaaagatttcctttgccgactgaccggttccttg
ttcttcatcaacacctactgctccatcctcttcctctgcgccatcagcgtcaatcggtac
tgggcggtcacccggcctctagacgcggcctcgtcagaccacaggcgccgcggaattgtc
gtttgcgtggttatctggttggcgaccgtctccatggctattccctttctggccaatccg
ggcaccaaccaggacgggaacgtcacccgctgcttcgagggctaccacaacggggacgac
tcatccaaaagggctgtggccgccacgcatttcgcaatcatcggactgttttctgtcgtt
ttcgcactggtggtggtgtgtaaccttctcatcgcccaagctttgttttcccaaaacgct
cctcagtccgagctcaagtccggaacgattttatccaggaagtccactatgacaatctca
tccaggaggcccactggggtgaaacgcagggctgtgcagatgctcatggcggtggtcggt
gtattcgtcctgtgcttcctgcctcatcacgtagtccaaggcttctggaccttggcggtg
ctgaagatccaaaagggatggggccacgtggactgggatagcgagaccgtgcagatgctc
aacgacgcgcaccagatcacattgcttctcatgggcctcaactgcattctggatccggtg
gtgtactgttttgccactcgcaaatttcgacggttcatcatggctcacatcaagagactg
gccaagggtgagggctgctcccacaccgttacctcacagatatctttagacagtcggcac
cagagccagagatttcccgatgaggtcatccagccagatatcaactga
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