Syngnathus scovelli (Gulf pipefish): 125980478
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Entry
125980478 CDS
T08785
Symbol
alms1
Name
(RefSeq) serine/arginine repetitive matrix protein 2 isoform X1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
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Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
125980478
NCBI-ProteinID:
XP_049595603
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Position
14:6320209..6328080
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AA seq
1263 aa
AA seq
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MSVPSRAAASKADKAGSSHKNGKLKTSIPHSQLQFQDSALSPALALFPTNTAEEASVTED
SLFQKSEAEFLPLSASLDFSARHDSDEGSLSQHPLAQETLTSEGESTLMQREADTVGAKV
LYGELLSQSNTSTSQMSQSKTSAPGSERDGAETSCLGVHDAKPSSDLSLDSGVTADSKLG
ASTSVVSLEVDDYAPCWTSPSKQAELNIEDRIPLYLQNLGIDQSPADILTPFAPRGPIRE
PEFSPTDLSTIKDSAGGTPMKSVTSSEAGSPLRAEISQSSTLLSFSQDAFQEVPSLVGQT
VTSSPPPTNIHQLAPGSHKDPRRDISGPRARSSLFVLRSPSCLEKPQESPAQPARVSSLT
IVPPAVAIQDRFSPRRAEPEGCSAACQSPLAVRPSPAVDEQEPIALPAHPPDERDEALLP
DDLEPLPEDSEDQSAMSDDSAQSSLTVRVAKLLRSGSQAEHISDQADPNHKKHFILSLSE
GRFDSLELDQEDRRRIEEIKATMLSNHFVTSESSTDTESTAASSVAAARTPLLDLAGTWA
PSFFTDAEQSVPQGRGRDGVKAHTSITIAAHKRPAASSPLPPEHLPPAQLDMRNGVDRKS
PLAVDGSQNAIKAESSTGLEERDGKEEMSRKRHMAEDTTIPFAHVSRAHLTFSPKAPEAA
PRAASSSSSSAELPGNKFVPLRRSSPAVSSTDEGVGPCSPPPKWDERRRQTSALHAPPPP
HCHHLHPPAHSVTTNAMRSYSPETPVRDECAPRASAPALQPYKPRSADQLFFMPQADADA
SSSCTTMESSRTGFDDAVPPLFSPEVLGQQDPGLDRGVTIKHAEGIYSKRRNNARTTTQP
PPQHPGGAVASNEGFPHASQRNSAMIECLRAGVGVPHEMDQSPLVPTCREAWLLEQLQRL
SDLILSTGGADVPPARMFYGRTEAWPQRPRSACALCPADRDESSTTTSTLDTDRLIRAFG
AHRIQSAKTSKSSGRLHKLYRDVAKQREQWEGRSFNTTHLETTGTDPSNVTGESSSTGSY
AKTPQRKTSKKPVSRDIQAGEVEIACNNMLRRTRDVGTMFPPPGRARWSSQKGHMTPLKH
KKTRTPPKAVWWFIPLDDSSKENEPDELQAVSPGPSTVWYDHAVAKTAREPLKPRQQLDD
DNEVAHRASSTSDHQVTSLQEALAMRRPDFILHSRQRVQILSRRKISAGLPGSSMPRRAV
PKKEMMQRTKQLCEGLPEVLCKLEMERRAAQLRLNRLNLEIFNKRINKRRLENRKTFQYE
KLW
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgccttctagagcagcggcaagcaaagcggacaaagcaggaagttcccacaag
aatggcaagttgaagaccagtattccgcattcgcaactccaattccaggacagtgctttg
tctccggcgctcgccctgtttcccacgaacaccgccgaagaagccagtgtgacggaagac
tctcttttccagaaaagtgaggcggaatttttgcctttgagcgcaagtctcgacttttct
gcaagacacgactctgatgagggctccttgtctcagcaccctttagcccaggagaccctg
acctccgaaggcgagagtactttaatgcagcgggaagcggacaccgtcggcgccaaggtg
ttgtatggagagctgctgtcccagagcaacacgtccacttcgcaaatgtcccaaagcaag
accagcgccccgggatcagagcgtgacggtgccgagacgtcctgcctgggtgttcacgat
gccaagccctccagcgacctgtcgctggattcgggggtgacggctgattccaagctggga
gcttcgacttctgttgtcagtttggaggtggacgactacgctccctgctggacctcaccg
tccaaacaggcagagctcaacatcgaagacaggattccattgtatctccaaaaccttggt
attgatcagtcgcccgccgacatcttgaccccgtttgcacccaggggaccgatcagggag
cccgaattctcacccactgatctcagcaccatcaaggattctgccggggggacgccgatg
aagagcgtcacatcatcagaagctggcagccctctgagagcagagatttcccaatccagt
acattgttatcattcagccaggacgctttccaggaagtgccatcacttgtgggacagacc
gtgacatcatcaccaccaccaaccaacatccatcagcttgcccccggttcccacaaagac
ccccgtcgtgatatttcaggtccccgagctcgctcctcgctcttcgtgctccgatcgccg
tcttgtttggagaaaccccaagaaagtcccgcccagccggcccgcgtgagctccctcacc
atcgtgccgcccgccgtcgccatccaggacaggttttcgcctcgacgggctgagccggaa
ggctgcagcgccgcctgtcagtcgcctctcgccgtcagaccatcgccggctgtggacgag
caggagcccatcgctcttcctgcacacccgcctgatgagcgggacgaggctttgctgccg
gacgatctcgagccgcttcctgaagactcggaggatcagtcggcaatgagcgacgacagc
gctcagagttcgctaacggttagggtggccaagcttctgcggagtgggtcgcaggctgaa
cacatctcggaccaggcggacccaaatcacaaaaagcacttcatcttgagtctgtcggaa
ggccgcttcgactcgttggagttggaccaagaggatcgacgacgcattgaagagatcaag
gcgacgatgctctccaaccactttgtcacgagcgagagcagcacagacacagagagcacg
gcggcatctagtgtggcggcggcacggactccgcttttggacctagcaggcacgtgggcg
ccttccttcttcacggacgccgagcaatctgtcccgcaaggtcgtgggcgcgacggcgtc
aaggcgcacacgtccatcaccattgccgcccataagcgccccgctgcctcctccccgctg
ccgcctgagcacctcccgccggcccagctggacatgaggaatggtgtggacaggaagtca
ccgttggcggtagacggaagccagaatgcgatcaaagcggagtcgagcactggcctggaa
gagcgggacggcaaggaggagatgtcccggaagcggcacatggcggaggacaccaccatc
cccttcgctcatgtgtcgcgcgcccacctcaccttctcgccaaaagcgcccgaggcagcc
ccccgtgccgcctcttcctcctcctcctcagcagagctccccggcaacaagtttgttccg
ctgaggcgctcctcacctgccgtcagcagcacagacgagggcgtcggcccgtgcagcccc
ccgcccaagtgggatgaacgcagacgccagacatctgctctacatgccccacctcctcct
cattgtcatcatcttcatcctcctgctcactctgtcactaccaacgccatgaggagctac
tcacctgaaacaccagtcagggacgagtgcgccccgcgtgcgtcggcgccggcgctgcag
ccgtacaagccccgcagtgccgaccagctcttcttcatgcctcaggcggatgccgacgcc
tcatcctcgtgcaccaccatggagagctcgcgcacaggttttgacgacgcagtgcctccg
ctgttcagccccgaggttctgggccagcaggacccaggcctggatcgcggcgtcaccatt
aagcacgctgagggcatctatagcaagaggcgcaataacgcacgcaccaccacacagccg
ccgcctcagcacccaggtggcgcagtggcgtcaaatgaaggatttcctcatgcaagccag
cgcaacagtgccatgatagaatgcctcagagcgggagttggagtcccgcatgaaatggac
caatcgccactagtgcccacatgtagggaggcgtggctactggagcaactgcagcgccta
tctgatctcatcctttccactggaggcgccgatgtgccacctgcgaggatgttttacggc
aggactgaggcttggccgcagcggccgcgcagtgcctgtgctctttgtcctgccgacaga
gacgagtccagcaccactacatccacgctggacacggatcgcctcatccgggcctttggc
gcccaccgcatccaaagcgccaagacctccaagagctctggccgcctccacaaactctat
agggacgtggccaagcagcgggagcagtgggaggggcggagcttcaacaccactcactta
gaaaccaccggcactgacccatccaacgtgacgggcgagtcgtcgtcgacgggctcctac
gcaaagacaccgcagcgcaaaacctccaagaagcccgtcagcagagacatccaagcaggc
gaggtggagattgcgtgcaacaacatgctccgtcgcacgcgagatgtgggaaccatgttc
ccgccaccggggcgagcgcgttggagctcgcaaaaaggtcacatgacccccctcaagcac
aagaagactcgaacgccacccaaagcggtgtggtggttcatcccgttggacgactcatcc
aaggagaatgagccggacgagctgcaagcggtgtcacccgggccgagtaccgtttggtac
gaccacgccgtggccaaaacggcaagagaacctctgaaacctcgacaacaactcgacgac
gacaatgaagtcgctcatcgtgcgtcctccacaagcgaccaccaagtcacttctctgcag
gaagcgctggccatgcgacggcctgatttcatcttgcactcacgtcagcgcgttcaaatc
ttgagtaggcggaaaatcagcgcaggactgccaggcagcagcatgccaaggagggcggtg
cccaagaaggaaatgatgcagcgcaccaaacagctgtgtgaaggacttccagaggttctc
tgcaagctggagatggagcgaagggccgcgcaactacgattaaaccggctcaacctcgag
atcttcaataagagaatcaataaacgtcgcttggagaaccgcaagactttccaatatgaa
aagctttggtga
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