Syngnathus scovelli (Gulf pipefish): 125980560
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Entry
125980560 CDS
T08785
Symbol
arid4a
Name
(RefSeq) AT-rich interactive domain-containing protein 4A isoform X1
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125980560 (arid4a)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125980560 (arid4a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
ARID
125980560 (arid4a)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
125980560 (arid4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
Sipho_Gp157
Motif
Other DBs
NCBI-GeneID:
125980560
NCBI-ProteinID:
XP_049595817
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Position
14:complement(4246121..4258059)
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AA seq
1301 aa
AA seq
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MKAADEPAYLTVGTDVSAKYRGAFCEAKIKIVKRLVKVKVTLKGESTSQVVHDDQVKGPL
RVGSTVEVKTNEGACSEAVISKLTDASLYTVVFDDGDEKTLRRSSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKSNRGRRFSQAVAGEENESSSSEEDEDDRRRLNDELLGKVCS
VKKEEQPAAWFLALVVSPSCNDELVVRKDQCLVRSFSDSKFCTVARRNVHPLNSISINKS
ELSNTQGFEAAQIFARRREVPEVWKMDMSQILDSSTSDEDDDNGEEKESEDDDTDEDEKR
KKLLKEEPEEEPDPEERDHFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVFQHGG
CRKIESGTVWKQIYMDLGIPILNSAASYNVKTAYKKYLFGFEEYCRSACITFRTIHHNNP
RSPKAHAVSRMAARSEFKEEDKGTESDSESDDPKDKQLSPRGSRRGGAKAEAPNKGGDEN
GEEPMDAPRRSSRRLDGSDRGSDDDEEEEEEEDQDEDDDQDDEDEERARRLGARSEDEGE
GDALTGTKVRVKYGRGKTQKIYEAHIKKTDTDNGEHFYLVHYYGWNVRYDEWVKADRIIW
PAERGTRKRTRKKVKNKEEVDKEDDKAPMAVLMATPPPTRPVLARRGRPHIRTAPANVPP
GRKMPSGEGKSNGKSARTDTPPNAANCDNAPRFRRTRRTSGMYDSDRASNEDSGNSTVDS
ESEEPPEKKLSPWRGRPENVGEGEEAVSAGKEAELSEVVVPTTTRLPVTPSRSSTPQEDV
AQLASPSEDEENPEDESLAVMDDVINEQKTVVEKLCPTSSPGRASPRYDELQDATPAPSK
DLKTPPLSPAMLKVHNSDRLPKISTSPSAINPEAPLPPPPAPAPPPRSVPKRPDEPMVVL
HCLPAPRLHPEHPTSTPTTVPSDTDSASEEEEEKPELKLRPERKQDEVTPASPKSLASPS
KVGAGMSPKSHPSPLRGAEAERRSHRAVRANEVQGQADEVSKEQPEKELRTPPQAQEALG
PAPNEEPQMGAEALLCHEVDLDDPDDKDKPTPSSEPLLLIAREQPPAPHRPFFPEPISCC
TPCPEVLRPASFEMEAETKVVVAAVATGAEKETDAQSSLDRNVTQEARGQKRLAECQTSP
TSKKHKRNHKRNSGTPKTDKNGTGHSSDSEDQSRLLSLSKSNKSRCTGAGSPHAKDKHSA
TSPQRAYKWTFQLDALDSMSSSERISFLQDKLQEIRKYYMSLKSEVASIDRRRKRLKKKE
REACCPSPTVSNTTLSSGSSDTAMSPSSASPTQSTLAVECR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagctgacgagccggcctacctgaccgtgggcaccgacgtgagcgccaagtac
aggggggccttctgcgaggccaagatcaagattgtgaagcggctggtgaaggtcaaggtg
actctgaaaggggagagcaccagccaggtggtccacgatgaccaggtcaaaggccccctc
agggtgggctccacggtggaggtgaagacaaacgagggcgcgtgcagcgaggccgtcata
agcaagctgacggatgccagcctctacaccgtggtttttgacgacggggacgagaagacg
ctgcgacggtcgtctttgtgcctgaagggtgagcggcactttgccgagagcgagaccctg
gaccagcttcctctgactaacccggaacactttggcactccggtcatcgggaagaagtcc
aaccgcggtcgtcgcttctcgcaggctgtggcgggcgaggagaacgagtcgtcgtctagt
gaagaagacgaggatgaccgcaggaggctgaacgatgaattgctggggaaggtctgtagc
gtcaagaaggaggagcagcccgccgcctggttcctggcgctggtggtgtcgcccagctgc
aatgacgagctggtggtgaggaaggatcagtgtctggtcaggtcgttcagtgactccaag
ttctgcacggttgccaggaggaacgtgcaccccctcaactcaatcagcatcaacaagtcg
gaactctccaacacgcaaggttttgaagcggctcagatatttgccaggcgcagggaggtg
ccagaggtttggaagatggacatgagtcagatcttggactcgtccaccagtgacgaagat
gacgacaacggggaggagaaggagagcgaggacgacgacacggacgaggatgagaagaga
aagaagctcctcaaagaggagcccgaggaggagccggacccggaagagcgagatcacttc
ctgcagcagctctacaagttcatggaggaccgaggcacgcccatcaacaagccgccagtg
ttgggttacaaggacctgaacctgttcaagctcttccgtctggtcttccaacacggcggc
tgtcgtaagattgagagcggcacggtgtggaagcagatctacatggacctgggcattccc
atcctcaactcggcggcatcgtacaacgtcaagacagcgtacaagaagtacctttttggc
ttcgaggagtactgccgctctgcctgcatcaccttcaggactattcaccacaacaacccg
cgctcgcctaaagcgcacgccgtctccaggatggccgccaggtcagagttcaaggaggag
gacaagggcaccgagtctgacagcgaaagcgacgaccccaaggacaaacagttgtcgcct
agggggagtaggcgaggcggcgccaaggcggaagcgcccaacaagggaggagacgagaac
ggcgaggagcccatggatgcaccgcggcgcagcagccggcgtctggacggctccgacagg
ggctctgacgatgatgaggaggaggaagaagaggaagatcaggatgaagatgacgaccaa
gatgacgaggacgaagagcgagccaggcgcctaggcgccaggagcgaggacgaaggggaa
ggcgacgccttgaccgggaccaaggtgagagtgaagtacggccgaggaaagacgcaaaag
atctatgaggctcacatcaagaagacggatacagacaacggcgaacatttctacctggtg
cactattacggctggaacgtcaggtacgacgaatgggtgaaggccgaccgcattatctgg
ccagccgagagaggaacccgcaagagaacccggaagaaggtgaagaacaaagaggaggtg
gacaaggaggacgacaaggctccgatggcggtgttgatggccacgcctccgccgaccaga
cccgtgctggccaggcgagggcgcccccatatccggactgcgcctgccaatgtgccgccc
ggtcgtaagatgccgagcggcgagggcaagtccaacggcaagagcgcccgcacagacacg
cctcccaacgcggcaaactgtgacaatgcgccacgcttcaggaggaccaggagaacttcc
gggatgtacgactcggaccgcgcctcaaacgaggattctgggaactcaacggttgatagc
gaatcagaagagccacctgaaaagaaactctcgccctggcggggcagacccgaaaatgtc
ggggagggggaggaggccgtgtcggcaggaaaggaggcagagttgagcgaggttgttgtc
ccgacaacgactcggctgcctgtcacgccatcccgctccagcacgccacaggaggacgtc
gcccagcttgcaagtccctccgaagacgaggagaacccagaagatgaatcgttggcagtg
atggacgacgtgataaatgagcagaaaaccgttgtggagaaactgtgccccacctcttcc
ccaggcagggcgtcccctcggtacgacgagctgcaggacgccacccctgcaccgtccaaa
gacctcaagaccccgcctttgtcgccagccatgctcaaagttcacaactctgataggctg
cctaaaatctccacctcgccatctgccatcaatcctgaagctccactgccgcctcctcca
gctcctgcacctcctcctcgaagtgtcccgaagagaccggatgaacccatggtggtcctc
cactgcctccccgcgccgcgcctccacccggagcacccgacttcaactccaaccaccgtg
ccctcagacactgactccgccagtgaggaagaggaggaaaaaccagagctgaagctccgc
cctgaaaggaagcaagacgaggttacacctgcctcccccaagtctttggcaagtcccagc
aaggtaggtgccggcatgtcacccaaatcccacccgtcgcccctgcgtggcgccgaggcg
gaaaggaggagccatcgagctgtgagggcgaatgaggtgcaaggacaagcagatgaggtt
tcaaaggaacagcccgagaaggagctccggacaccgccccaggcccaggaggccctcggg
cccgccccaaacgaggagccacaaatgggtgccgaggcgttactttgccacgaagtagac
ctagacgaccccgatgacaaggacaaacccaccccttcctcggagcccctcctcctcatc
gcccgggagcagccaccagctccccatcgccccttctttcccgagcccatctcctgctgc
accccctgtccggaagtactccgcccagccagtttcgagatggaggcagagaccaaggta
gtggtggctgcggtggcaacaggcgcagagaaagagacagacgcccagtccagtctggac
cgcaacgtgacgcaagaggcccgaggtcagaagcgtctggcagagtgtcagacaagcccc
acctccaagaaacacaaacgaaaccacaagcgcaacagtggcacccccaagactgacaag
aacggcactggtcacagcagcgatagtgaggaccagtcacgtcttttgtctctgtcaaag
tccaacaagtctcgctgcactggggctgggtcgccacacgccaaagacaaacatagcgcc
acctccccacagcgagcctacaagtggaccttccagctcgacgctctggacagcatgtcg
agcagcgagaggatctctttcctgcaggacaagcttcaggagatccggaaatactacatg
agcctcaaatctgaggtggcgtccattgacagacgtaggaagcgcctaaaaaagaaggag
cgggaagcgtgttgtccatccccaacagtgtccaacactactctgtcctcgggttcctcg
gacacggccatgagtccatcctctgcctcgcccactcagagcaccttggctgtggagtgc
aggtga
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integrated database retrieval system
