Syngnathus scovelli (Gulf pipefish): 125980571
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Entry
125980571 CDS
T08785
Symbol
snx6
Name
(RefSeq) sorting nexin-6 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125980571 (snx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125980571 (snx6)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125980571 (snx6)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Macropinocytosis
Sorting nexins
125980571 (snx6)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125980571 (snx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
AceES-2
Motif
Other DBs
NCBI-GeneID:
125980571
NCBI-ProteinID:
XP_049595849
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Position
14:complement(4262899..4269434)
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AA seq
407 aa
AA seq
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MMQEGLDDGPDFLSEEDRGPRAVSVDLQTDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQSEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSVRGKN
KKEKLEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDASTKSDRMIRSHK
NAADDINRMASSLYALGTLDSTDLCKFFLKVSELFEKTRKIEARVAADEDLKLADLLKYY
LRESQAAKDLLYRRSRALLDYENANKALDKARAKNRDVLQADTSQQLCCRKFDKISESAK
QELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCLGILKVNT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggaaggactggacgacggaccggacttcctctccgaggaggaccgaggaccc
agggcggtcagcgtggacctccagacagacgccacgctgcaggtggacatctcggatgcc
ctgagcgaacgagacaaggtcaagttcactgtgcacaccaagagcacgctgcccaacttc
aagcagagtgaattctcggtggtccgccagcatgaagaattcatctggctgcacgactcg
ttcgtggagaacgaagactacgccgggtacattatcccgcccgccccgcccagacccgat
tttgacgcctccagagagaagctgcaaaagttgggcgagggagagggctccatgaccaag
gaggagttcaccaagatgaaacaggaacttgaagcagagtacctggccatctttaagaag
accgtggctatgcacgaggtttttctgtgtcgcgtagcggcgcaccccatcctcaggaag
gacctcaacttccacgtcttcctggaatacaaccaggacctgagtgtgcgtggtaagaat
aagaaggaaaaattggaggacttcttcaagaatgtggtcaagtcggccgacggtgtcttg
gtggcgggcgtcaaggacgtggatgacttctttgagcacgagaagacttttctgttggag
tatcacaacagagtcaaagacgcctcaaccaaatccgacaggatgatccgctcccacaag
aatgctgcagatgacatcaaccgaatggcgtcgtcgctgtacgccttgggaacgctggac
tccactgacctgtgcaagttcttcctcaaagtgtccgagctctttgagaagaccaggaaa
atcgaagctcgtgtggccgccgacgaggacttgaagttggctgacttgttgaaatactac
ctgagggaatcgcaggctgcaaaggacctcctgtaccggcgcagtcgagcgctgctggac
tatgagaacgccaacaaggctctggacaaagctcgcgccaagaaccgcgacgtcctgcag
gcggacaccagtcagcagctgtgctgccgcaagtttgacaagatctcagagtctgccaag
caagagcttatcgattttaagacgaggcgagtggcggcattcagaaagaacctggtggag
ctggctgagctggagctcaaacacgctaaggggaacctgcagttgttgcagagttgtctg
gggatcctgaaagtaaacacttag
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