Syngnathus scovelli (Gulf pipefish): 125980572
Help
Entry
125980572 CDS
T08785
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like 2 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125980572 (tbpl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125980572 (tbpl2)
03021 Transcription machinery [BR:
sscv03021
]
125980572 (tbpl2)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
125980572 (tbpl2)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125980572 (tbpl2)
RNA polymerase III system
TFIIIB
125980572 (tbpl2)
RNA polymerase I system
SL1/TIF-1B
125980572 (tbpl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
125980572
NCBI-ProteinID:
XP_049595851
LinkDB
All DBs
Position
14:complement(4086474..4089720)
Genome browser
AA seq
336 aa
AA seq
DB search
MDESVLERYLDDSFANDSGFLDGEDASLPSTADPLPPSPKVSGELSDDLDLSFLPDELSA
STQDTEGGGSVALASHHESEDEEQPFSSSSRLANESAIFCPMTPMTPMTPMTERSGIVPQ
LQNIVSTVNLGCPLDLKFIALQARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA
KSEEQSRLAARKYARVVQKLGFPARFLEFKIQNMVASCDVCFPIRLEGLVLTHQQFSRSQ
LPRTSSLRNVLAHPAAVHLPAQSCYCSCWCSSCCSWSGSSSPSCPCPSLSSCNLFFSDHF
PVSACALQTVTPCSCIVFTQDLILDTTHLVLVPGKF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcggtgctggagcgttacttggatgactcttttgcaaatgactctggcttc
ctggacggggaagatgccagcctcccgagcacggccgacccgctcccgccctccccgaag
gtgagcggtgaactgagcgacgacctggacctcagcttcctacctgacgagctgagtgcc
agcacacaggataccgaaggcggtgggagcgtcgctctggcatcccaccacgaaagtgaa
gatgaagaacaacctttttcgtcatcctcacgattggctaacgagagtgccatcttctgc
cccatgacccccatgacgcccatgacccccatgacggagaggtcagggatcgtcccgcag
ctgcagaacatcgtctccacagtgaacctgggttgtccgctggacctcaagttcatcgcc
cttcaagccagaaacgcagagtacaaccccaagcgcttcgctgcagtcatcatgaggatc
cgagagcccagaaccacggcactgatcttcagttctgggaagatggtctgcaccggagcg
aagagtgaggagcagtcccgactagcggccaggaagtacgcccgcgtggtgcagaagttg
ggcttccccgctcgcttcctggagttcaagatccagaatatggtggccagctgcgacgtc
tgctttcccatccgtctggagggcctggtcttgacccaccagcagttcagcaggtcgcag
cttccacgcacttcctctctgcgcaacgtcctcgctcatcctgctgctgtgcatcttccc
gctcagtcttgttactgttcctgctggtgttcttcttgttgctcttggtcaggctcaagt
tctccatcctgtccttgcccatcacttagttcctgcaacttattctttagtgatcatttt
cctgtttctgcatgtgctcttcagactgttactccttgctcatgtatagtttttacacag
gatctcattcttgatactacgcatttagtacttgttccgggcaagttctga
DBGET
integrated database retrieval system
