Syngnathus scovelli (Gulf pipefish): 125980590
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Entry
125980590 CDS
T08785
Symbol
arhgef10
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125980590 (arhgef10)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125980590 (arhgef10)
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125980590 (arhgef10)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
125980590 (arhgef10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
DH_Alsin
URGCP_9th
DAM-like-phage1
Motif
Other DBs
NCBI-GeneID:
125980590
NCBI-ProteinID:
XP_049595872
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All DBs
Position
14:complement(8094818..8123471)
Genome browser
AA seq
1400 aa
AA seq
DB search
MDMEEFPPPPAEILDDDEDEGEAFDFDDSGDDIPEVDKPPPKPSNEDQSSGDLVCHPAEG
DISSMAPQIPSIFPDSPPSAESSEADGADQKELDLPLPPPPEDVLETDAGNEQQEVSSYV
QSVPKSSSKVNPYSVIDISPLEPQQHEQLDCSLSPSEPGEPKEQVGEASDSHSSPGGITS
GYSVPVPCGYATPSGVPLITPAYTTPVIIRHFSADEDVTVIRTGNISADSVFSEEFPPIR
EEDALAKWASDPANTSWMENPDEVIYDDVPRENSDSNTEPDEMIYDDVELGEEGGSLDNG
WSSSEFESYDEASDGEGHSENGLPNAFMRGTPAQKKTHLSQDLSRLKEHYEKKMKDLMAN
TVGTVELQQLKQKHEQKMQKLVKAAKEGTKDGLEKTKAAVKKGRSFIKTKSFYNERKSTC
FEDEESEFFIEVDCFNVEPILGPAPEGLSQQQLVRRCILGSILESEKNYLDALKRILEHY
EKPLSQIEPRLLSDRKLKMTFYRVREILQCHFLFQIALASRVAEWDNLAMIGDVFVASFS
KSMVLDAYSEYVNNFSTAMSVVRKTCASKPGFLEFLKHRQETSSDRMTLYGLMMKPIQRF
PQFILLLQDMLKNTPVGHADRLPLQMALTELETLAEKLNEKKREADQRCEIRHIAKAMNE
RYLNKLLSNGSRYLIRSDDMVETVYNERGEVMKTKERRLFLLNDVLMCATPNIRCQDGSS
SGSAPLDQRFLLKWSVPLSFVESLEFGSSEDIPDTTRYPASHSGEKVVLNAKPNKLYMGP
GQLYQDLQNLIHDLSLVNQISSMISSLKGNYQNVNPTVAQDWVSGLQRLILKKEEEIRAA
DRCRIQLQLPGKQDNRLGKATYFSAVFNTLNPAIKQSWISNLQMAKLALEEDNLQGWLFA
EDDGNQLKKQKHPLLLKQMPVVMSKLQEFKVECAVHNPEPYINTESTADTPVVGHGCVWV
ASCTNQMGQIAIVAMQSCSPKVTECFNVESRILCMAFVPAEEPRENDDKVQQSNQLPKTG
ATPTVCLGMEEGSIIVYKSSQRSKKVRLQQFFTPDKSTVTSLSYMKGCLYAGLVSGSVAI
YSRSQDGLWISDKPKVVKLGVLPIKAMLAVEEHLWASSGGQVFIISTQTHCVERQLEAHQ
EEGMVVSHMVAAGVGIWIAFSSGSTLRLFHTETLEHLQDINIATPVNNLLPGNQRVSVSS
LLVCHGMLLVGTNLGVTVALSVPRLQGIPKVTGRGMVSLHAHNGPVKFLTVATAVCNRTP
GLSCPASSASAQQGEPEDGEGALPPSDSTSTSLQSQGVWLGEAGCTTMALQDSRPSSSCS
SLVQSQSSLEHGPEDGALYDVLHDPAHHQRGRRTSKVDVSSLLVVSGGLGHRRVNKKTKQ
SRHEDNTSTILIWQIPLLNM
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaagaatttcctcccccgcctgctgaaattttggatgacgatgaagatgaa
ggggaagcctttgatttcgatgacagtggggatgacatcccagaagttgacaagccacca
ccgaagcccagcaatgaggatcagagttccggggaccttgtgtgtcatccggcagagggt
gacatctccagtatggctccccaaataccttccatcttccctgacagcccaccttcagca
gaatcatctgaagctgacggggctgatcaaaaggagctcgatctaccactgccccctcca
cctgaggacgttctagaaacagatgcaggaaatgaacagcaggaagtgtccagctatgtc
caaagtgtcccaaagagctcctccaaagtcaacccttactctgtgattgacatcagtcct
cttgagccgcagcagcacgagcagctcgattgctccctttctccttccgaaccaggagag
cccaaggaacaagttggagaagcctcggattcccacagcagccccggtggcatcacctca
ggctattccgtacctgtgccttgcggctatgcaactccatccggcgtaccgcttatcacg
cctgcttacactacacctgtgatcattcgacacttctctgcggatgaggatgttacagtg
attcggactggcaacatttccgctgacagtgttttcagtgaagagtttccacctattaga
gaggaggatgctttggcgaagtgggcatcggatcctgccaatacttcatggatggaaaat
cctgatgaggtgatttatgatgatgtgcccagggagaactctgattccaacacagaacca
gatgagatgatttacgacgacgtggagctcggtgaggaaggaggttctctcgacaatggc
tggagctccagtgagttcgaaagctacgacgaggcgagcgatggggaagggcattctgag
aatggcctgcccaacgccttcatgagggggacgcccgcccagaagaaaacccatctctct
caagatctgagccgcttgaaagagcactatgagaaaaagatgaaagatctaatggcaaat
acagtcggaactgtcgagctgcagcagctcaaacagaaacacgagcagaagatgcaaaag
ttggtgaaagcagctaaagaagggaccaaagatggacttgagaaaaccaaagctgcagtt
aagaagggccgttctttcatcaaaaccaagtctttctataatgagaggaagtctacctgt
tttgaagatgaggagtctgagttcttcattgaggtcgattgttttaacgttgagccaatt
ttgggtccagccccggaagggctttcacagcagcagctggtgagacgttgtatattgggc
tccatactggagagtgagaagaactatcttgatgcattgaagagaatcctagagcattat
gaaaagcccttgtcccagattgaaccaaggttactgagtgacaggaaactgaagatgacc
ttctatagagtgcgagagatcctgcagtgccacttcttgttccagatcgctctggcgagt
cgagtggctgagtgggacaacttggccatgatcggggatgtctttgttgcctcgttctca
aagtctatggtgctggatgcctacagtgagtacgtgaacaactttagtacagcaatgtca
gtggtgagaaaaacatgtgcttcaaaacctggcttcctggaattcctgaagcatcgtcaa
gaaacaagcagtgacaggatgactttgtatggcctgatgatgaaaccaatccagaggttt
ccacagttcattctgctcctccaggacatgctcaaaaacacaccagtaggccatgcagac
cgcctgcccttgcagatggccttaacagaactggagaccctggctgagaagctcaatgaa
aagaagagagaagctgaccagcgctgcgagatacgtcacatagcaaaggctatgaatgaa
cgttaccttaacaagctcctgagtaacggtagccgctacctgatccgctcagacgacatg
gtggagacagtctacaatgagcgtggtgaagtcatgaaaacaaaggagcgccgccttttc
ctactcaacgatgttctcatgtgcgccacgcccaatattcggtgccaggacggcagtagt
agtggcagtgctccattagaccaacgcttccttctaaagtggagtgttcctttgagcttc
gtagaatcgctggagtttggatccagtgaggacattcctgacaccacccgttaccctgcc
tcccattctggggagaaagtggtcctcaacgcaaagccaaataaactctacatgggccca
ggtcagctgtaccaggatctgcagaacttaattcatgacctcagcctggtcaaccaaatc
tccagcatgatcagcagcctcaaaggcaactaccagaatgtgaaccccacagtggcccag
gactgggtatcgggtctccagaggctgattctgaagaaggaagaagagattcgggcagct
gaccgttgtagaatccaactccagctgcctggcaaacaagacaacaggttaggcaaagct
acatactttagcgcagtgttcaatactctcaaccctgccattaaacaatcatggatcagc
aacttgcaaatggctaaactggctctagaggaggacaaccttcagggctggttgtttgca
gaagatgatggaaatcaacttaaaaagcagaaacatcctctcttactcaaacagatgcca
gtggtgatgtcgaaactacaagagttcaaggtggagtgtgcagtccacaacccggagccc
tacatcaacactgagagcactgcagatactccggtcgtgggtcatggttgtgtctgggtt
gcaagttgcaccaaccagatgggccaaatagccattgttgccatgcaaagctgcagccca
aaggtgacggagtgctttaatgtggagtcccgtatcctctgcatggcgttcgtcccagca
gaggagcctcgggagaatgacgacaaagtccaacaaagcaaccagctgccaaaaacgggc
gctacacccactgtctgcctgggcatggaggagggcagcattattgtctataaaagcagc
cagcggtccaagaaagtgcgcttgcagcagtttttcaccccagacaaatccactgtcacc
agcttgtcttacatgaaaggctgtttgtatgctggcctggtcagcggctctgtggccatc
tactccagatcacaagatgggttatggatcagcgataagcccaaggtggtgaagctggga
gtcttgccgatcaaagctatgctggctgtggaagagcacctttgggcttcatccggtggg
caggtcttcatcattagcacacagactcactgtgtggagaggcaattggaggcccatcag
gaggagggtatggtggtgtcccacatggtggcggctggtgtgggcatctggattgccttc
agctcaggttccaccttgcgcctctttcacaccgagaccttggagcatctgcaggatatc
aatattgcaacgcctgtcaacaatttattgcctgggaaccagagagtgtcagtaagcagt
ttgctggtttgccatggcatgctgctcgtcggaaccaaccttggcgtgaccgtagcactc
tccgtccccagactacagggtatccccaaggtcacaggtcgcggcatggtatccttgcat
gctcacaacggcccagttaagttcctaaccgtggccacagcggtgtgcaaccgaaccccg
ggcctctcatgccccgcctcttcagcgtcagcccagcaaggggagccagaggatggagaa
ggtgctctgccaccctcagactccacttcaacctcgcttcagagccaaggagtatggcta
ggagaggcaggctgcaccaccatggctctccaggactcacggccttcttcatcctgcagc
tctttagttcaatcccaaagttccttggagcacgggcctgaggacggggccctttacgac
gtgcttcatgatccggcccaccatcagaggggccgtcgtaccagcaaagttgacgtcagt
tctctcctggtggtttctggaggtttgggacaccgccgggtgaacaaaaagaccaaacag
tcacgccatgaggacaacacctcgaccatcctaatctggcagatacccttgctcaacatg
tga
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