Syngnathus scovelli (Gulf pipefish): 125980663
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Entry
125980663 CDS
T08785
Symbol
gpc4
Name
(RefSeq) glypican-4
KO
K08110
glypican 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125980663 (gpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sscv00535
]
125980663 (gpc4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125980663 (gpc4)
Proteoglycans [BR:
sscv00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
125980663 (gpc4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Others
125980663 (gpc4)
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GFIT
Motif
Pfam:
Glypican
Fz
ExsA_N
Motif
Other DBs
NCBI-GeneID:
125980663
NCBI-ProteinID:
XP_049596059
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Position
1:complement(16964275..16990567)
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AA seq
552 aa
AA seq
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MKTLLLLCVLSTLVVFCVSATAEQKSKNCNDVRVAYSSKGFNVNDVPNKGVNGASLKVCP
QGFSCCTVEMEEKLSQQSHYDIKAPVFRLSTNLVSTFRQRHQHFDQFFRELLKNAEESLH
NMFVRTYGMMYVQNAELFKNFFQSLTRYYVSGSSAVNLESMLSDFWADLLERMFRLVNVQ
YEFSDAYMECVSRHTEQLQPFGDVPRKLRIQLTRAFVAARTFVRGLNLMPQVVNKVSTVS
ASPSCVRAAMKMLYCPYCSGQVALKPCQNYCLNVMRGCLANQADLDTEWNNFLDAMLGLA
ERLEGPFNFESIMDPIDVKLSDAIMNMQENSMQVSQKVFHGCGQPKPSRTKRSAKDTVFA
GRFRPYSPDARPTTAAGTSLDRLTSDVKKKLKHAKKFWSTLPDTHCAGERIAPGDDCWNG
TAKSRYEAVVIGNGLANQVSNPDVDVDITKPDIVIRSQIAVLKEMTSWLKAAYNGNDISI
DNDEEASGGEESGSGCDSPSCDTDRDIYFSTPPNPVDPRVNLVQGEKSDGVTLQGSMALA
LCGLALLAAHLR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctgctgctgttgtgtgtgcttagcacgctggtcgtgttttgcgtttcggcc
acggcggagcaaaagtcgaaaaactgcaacgatgttcgagttgcttacagctccaaaggt
ttcaacgtcaacgatgttcccaacaaaggcgttaacggagcatcgctgaaagtgtgtcca
cagggtttctcctgctgcacggtggagatggaggagaagctaagccagcagagtcactat
gatatcaaagcccctgtcttcaggctgagcaccaatctcgtgtccacctttcgacaaagg
catcagcactttgaccagttcttccgagaacttttgaaaaatgcagaggagtcactgcac
aacatgtttgtacgaacgtacgggatgatgtacgtgcagaatgccgagctcttcaagaac
ttcttccagtccctgacgcgctactacgtgtccggcagctcggccgtaaacctggagtcc
atgctgtcggacttttgggccgacctcctggagaggatgttccggctggtcaacgtgcaa
tatgaattcagcgacgcctacatggagtgcgtcagccggcacacggagcagttgcaacct
tttggggatgtgccccgcaagctccgcatccagttgacgcgtgcttttgttgccgcacgt
acatttgtgcgtggcctaaaccttatgccacaggtggtcaacaaagtctcgacggtcagc
gcgtctcccagctgtgtgcgagcggccatgaaaatgttgtactgtccctactgctcgggc
caagtggcgctgaagccctgccagaattattgtctgaatgtgatgcggggctgtttggct
aaccaggcagacctggacacagagtggaacaactttcttgatgccatgcttggtctggct
gagaggctggagggtcccttcaatttcgagtccatcatggatcccattgatgtgaagctt
tccgatgccatcatgaacatgcaagagaacagcatgcaagtttcacagaaggtattccat
ggatgtggccagcctaaacccagccgcaccaagcgttctgccaaagacaccgttttcgct
ggccgcttccgcccctacagccctgacgcaagacctaccactgctgccggaacaagctta
gatagactgacgagtgatgtaaagaaaaagttgaaacacgccaagaagttctggtccaca
ctgccagacactcattgtgctggtgagagaattgcacccggtgatgactgctggaatgga
acagccaaaagcaggtatgaggcagtagtcattggcaatgggctggccaatcaggtgtcc
aaccccgacgtggacgtggacatcacgaagccagacattgtgatacgaagccagattgcg
gttctgaaggaaatgacgagttggctgaaagctgcatacaacggcaacgatatttcaatt
gataacgacgaggaagccagcggaggagaggagagcggcagcggctgcgattctccatct
tgtgacacagatcgggacatctacttctccactcctcccaatcccgtggatcctcgagtt
aatctggtgcagggggaaaaatctgatggtgtaaccctgcagggaagcatggcactagca
ctctgcgggctggccctgcttgccgcccacttgagataa
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