Syngnathus scovelli (Gulf pipefish): 125980714
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Entry
125980714 CDS
T08785
Symbol
odc1
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00330
Arginine and proline metabolism
sscv00480
Glutathione metabolism
sscv01100
Metabolic pathways
sscv04148
Efferocytosis
Module
sscv_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
125980714 (odc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
125980714 (odc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125980714 (odc1)
Enzymes [BR:
sscv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
125980714 (odc1)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
125980714
NCBI-ProteinID:
XP_049596109
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All DBs
Position
14:complement(14259989..14263917)
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AA seq
456 aa
AA seq
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MNTAEVDFSFLEEGFSAKDIVEQKINESSMTDDRDAFYVCDLGDVLKKHLRWARALPRVS
PFYAVKCNDSSVVLTTLASLGTGFDCASKTEIQLVQSLGVDPSRIIYANPCKQVSQIKYA
SAHGVQMMTFDSEMELMKVARCHNNAKLVLRIATDDSKAVCRLSIKFGAQLKACRGLLER
AKELALDVIGVSFHVGSGCTDAEAYKQAIADARCVFDIGHDLGFCMNLLDIGGGFPGSED
TELKFEEITAVINPALDKYFPADTGVRIIAEPGRFYVASAYTLVVNIIAKKVLMDDESGS
DEEDEGTSDRSLMYYVNDGVYGSFNCILYDHAHCLPTLHKKSKPDEAMYPCSIWGPTCDG
LDRIVEQCNLPDMHVGDWLLFENMGAYTVAASSTFNGFQKPDIHYVISRPAWKHVQQICS
QGLPVPAGTCTLDVPACCGRESNLEIPVKPPQAHVL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggccgaggttgatttctctttccttgaggagggcttttctgccaaggatatt
gttgagcagaagatcaatgagtcatccatgacggatgacagggatgccttctatgtgtgt
gacctgggggatgttttgaagaaacacttgcgttgggcaagggcacttcctcgtgtctct
cctttctatgcggtcaaatgcaatgacagcagtgttgttttgacaacattggcgtcactg
ggaactggttttgactgtgccagcaagaccgagatccagctggttcagtctctgggagta
gatccgagcagaatcatctacgccaacccttgcaagcaggtgtctcagatcaagtatgct
tctgcccacggggtccagatgatgacttttgacagtgaaatggagctgatgaaagttgct
cgctgtcataacaatgccaagttggtgctgcgtattgccaccgatgactccaaggcagtt
tgccgcctcagtatcaagtttggggcccaacttaaagcatgtcgagggcttctggagagg
gccaaggaactggctttggatgtgatcggcgtcagcttccacgtcggcagtggctgcact
gatgctgaggcctacaagcaagctattgcagatgcccgctgtgtctttgatatagggcat
gatctgggcttctgcatgaaccttttggacatcggagggggttttcctggttccgaagac
acggagctcaaatttgaagagatcactgcggtaatcaacccagccctggacaagtatttc
cccgctgacaccggtgtgaggatcatcgcagaaccgggtcgcttttacgtggcctcggct
tacaccctggttgttaacattatcgccaaaaaggtcctcatggatgacgagtcaggttct
gatgaggaagatgaaggtacgagtgacagaagcctcatgtactatgtcaacgatggagtg
tatggatccttcaactgtattctgtatgaccacgctcattgtctgccaaccttgcacaag
aagtccaagccagatgaggccatgtatccctgcagtatttggggaccaacatgcgatggc
cttgaccgtatcgtggagcagtgtaacctgcccgacatgcacgttggcgactggctgctc
ttcgagaacatgggggcctacactgtggcggcttcttccacgttcaatggcttccagaag
cctgacattcactatgtcatttcgcggccagcttggaaacatgtgcagcaaatctgctcc
cagggcctgccggttcctgcgggcacctgcacacttgatgttccagcctgctgtggaaga
gagagtaacttggagattcccgttaagccccctcaggctcatgtgctttaa
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