Syngnathus scovelli (Gulf pipefish): 125980715
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Entry
125980715 CDS
T08785
Symbol
atp6v1c2
Name
(RefSeq) V-type proton ATPase subunit C 1-B isoform X1
KO
K02148
V-type H+-transporting ATPase subunit C
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00190
Oxidative phosphorylation
sscv01100
Metabolic pathways
sscv04145
Phagosome
sscv04150
mTOR signaling pathway
Module
sscv_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
125980715 (atp6v1c2)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125980715 (atp6v1c2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125980715 (atp6v1c2)
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Gene cluster
GFIT
Motif
Pfam:
V-ATPase_C
Motif
Other DBs
NCBI-GeneID:
125980715
NCBI-ProteinID:
XP_049596110
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Position
14:14273028..14277357
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AA seq
448 aa
AA seq
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MSLTRGLWAGCSLVRQTLCTLHCGTLTQDPNEDNLKVFNDVVEVMRDLWLISVPLDKTSV
KSVEKLQHIIGKTNHASCYKFTIPDLKVGILDSLLSVSDELYTLDALTESVLNKTCQCMR
EMMEQDEVMANVLADGGQNTKPRDLQSPFKDYMKSLRVGILNYVTNFHWDKAKYPTSLPL
SSLVNIINKEVSQVETELKSRAAVYNSVNASLQCLEPTSGGSLQTCSLNGMVRREDLVVS
EYLTSLLAVVSRGDYVNWEQKYESLSEFVVPRSSRKLYEDGEWGIFSVTLFKRDVYEFKA
KAQESNMQPIYIRRFTVREYCFDLEEKQQREWKELRVHGKQQYGVFVHWLKVNFSQVFMA
WIHLKAARVFVESVLRYGLPVNYQALLLQSDRKCSEKLRQELASLFLHLDPTANVSETDV
TCDIPGLFQQEYFSYICFYVNTNMLDFS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgaccagaggtttgtgggctggctgtagtctcgtgaggcaaactctctgcaca
cttcactgtggaacactgacacaggatcccaatgaagataacttgaaggtatttaatgac
gttgtggaagtcatgcgagacttgtggttgatatctgtcccattggataagaccagtgta
aagagtgttgagaaacttcagcacatcattggcaagactaaccacgcatcttgctacaaa
ttcaccattccagatctgaaggttggaatactggacagtcttctcagtgtgtcagatgaa
ctctacacacttgatgccttgactgaaagtgttttgaacaaaacatgtcagtgtatgaga
gaaatgatggagcaagacgaagtgatggcaaacgtcttagccgacggaggccagaacaca
aagccgagagacctccagtccccatttaaggactacatgaagtctctgagagtgggcatt
ctaaactatgtgaccaacttccattgggacaaggccaagtatcccacatcgctgcctctc
tccagcctggtaaacatcatcaataaggaggtttcacaagtggaaacagaattaaaatcc
cgagctgctgtgtataacagtgtaaacgcaagcttgcagtgcctggagcccacatccgga
gggagtttgcaaacatgcagcctgaacggtatggtgaggagagaagacctggtggtgtca
gaatacctcactagtttgctggcggtggtgagcaggggggactatgtgaattgggagcag
aagtatgaatcattgtcagagtttgtggttcctcggtcaagcagaaaactctacgaggac
ggagaatggggcattttttcagtgacacttttcaaacgagacgtttatgaattcaaagcc
aaagctcaggaaagcaatatgcaacctatatacatacgtaggttcactgtacgcgagtac
tgcttcgacctggaggagaagcagcaacgggagtggaaggagctccgtgttcatggaaaa
caacaatacggcgtgtttgtgcattggctgaaggtgaattttagccaggtgtttatggcc
tggattcatctgaaagcagcaagggtctttgtggagtcagttctccggtatggattacct
gtcaactatcaggcccttctgcttcagtcagacaggaagtgttcagagaaactgagacaa
gaacttgcctcattgttcttgcatcttgacccaaccgccaatgtcagcgagacggacgtg
acctgtgacattccaggactcttccagcaggagtacttctcctacatctgcttttatgtt
aacaccaacatgctggacttcagctaa
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