Syngnathus scovelli (Gulf pipefish): 125980742
Help
Entry
125980742 CDS
T08785
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125980742 (scfd1)
Membrane trafficking [BR:
sscv04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
125980742 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125980742 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Peptidase_S66
PS_pyruv_trans
Motif
Other DBs
NCBI-GeneID:
125980742
NCBI-ProteinID:
XP_049596185
LinkDB
All DBs
Position
14:4854596..4862010
Genome browser
AA seq
632 aa
AA seq
DB search
MAASVRDKQTVALRRMLNFNTPPVKNATSEPVWKVLIYDRFGQDIISPLLSVKELRDMGV
TLHLLLHSDRDPIPDVPAIYFVMPSEENVDRMCQDLRNQLYESYYLNFISAISRSKLEDI
AGAALAANAVSQITKVYDQYLNFITLEDDMFVLCHQNKELISYHAINRADAQDADIEAIM
DTIVDSLFCFFVTLGAVPVIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMAAGQ
FSFQRPLFVLADRNMDMATPLHHTWTYQALIHDVMDFHLNWVVLEEGAVAEASPAGARPK
KKSRRTYDLTPADKFWQKHKGSPFPEVAESVQEELDAYRAQEDEVKHLKSIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTPEDKMRLFLIFFITAQQPPSESDVEQYKRAMLDAGCDLSPL
NYIKQWKAFTKMSTTPANYGNSGVKPMGLFSRVMNSGSQLVMEGVKNLVLKQHNLPVTRV
LDNLMEMKSHAETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
ARSKAGKKILYGCSELFNASQFLKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcggtgcgcgacaagcagacagtggctctgaggcgcatgttgaacttcaac
actcctcccgtgaagaacgccacgtccgagccagtatggaaggtgctgatctacgaccgc
ttcggccaggacataatctcacctctgctgtctgtcaaagagctgcgggacatgggcgtc
accctgcacctcttgctccactcggaccgagatcccattcccgacgtgccggccatatac
tttgtcatgccctcggaggagaacgtcgacagaatgtgtcaggacctgaggaaccagctg
tacgaatcgtactacctgaacttcatctcggccatcagccgaagcaaactggaggacatc
gccggtgctgccttggccgctaatgccgtcagccagatcaccaaggtttacgaccagtac
ctgaacttcatcacgctcgaggacgacatgtttgtcctgtgccatcaaaacaaggagctc
atctcgtatcacgctatcaaccgggcagacgcacaggatgccgacatagaggccatcatg
gacaccatcgtggatagcctcttctgcttcttcgtcacccttggcgctgtgcctgtcatc
cggtgtccccgtggcaacgcggccgagatggttgccgtgaagctggacaagaagctgcgt
gaaaacctccgcgacgccaggaacagcctgttcacgggagacaacatggccgccgggcag
ttcagcttccagaggccgctgttcgtcctggctgaccgcaacatggacatggccacaccc
cttcaccacacatggacatatcaggcgctcatccatgacgtcatggacttccacctcaac
tgggtggtgctggaggagggcgcggtggccgaggcgtcccccgccggcgccagacccaaa
aagaagagccgccgcacgtacgacctgacgcccgccgacaagttttggcaaaagcacaag
ggcagtccctttccggaggtggccgagtcagtccaggaggagctagacgcgtaccgggcg
caggaggacgaggtcaaacatctgaagagcatcatgggcctggagggcgaggacgagggc
gccatcagcatgctgtccgacaacaccgccaagctcacgtcggccgtcagttctctgccc
gagctgctggagaagaaacgcctgattgatctgcacaccaacgtggccacggccgtgctg
gatcacatcaagagccgaaaattagatgtttattttgagtatgaagaaaaactgatgagc
aagtcgactttggacaaatctctcctggacatcatcagtgacccggatgcggggactccg
gaagacaagatgcgactcttcctcatcttcttcatcacagctcagcagcctccttctgag
tctgacgtggagcagtacaaaagggccatgctggatgccggctgtgacctgtcgcccctc
aactacatcaaacagtggaaggccttcaccaagatgtccaccacccccgctaactacggc
aacagcggagtcaagcccatgggactcttctcacgagtgatgaatagcggttctcagctg
gtgatggagggagtgaagaacttggtgctcaagcagcacaacctcccagtgacgcgagtc
ctcgacaacctgatggagatgaagtcgcacgctgaaacggacgactatcgctactttgac
ccaaagatgctgcgtggcagcgaaagctccattcccaggaacaagaaccctttccaggag
gccatcgtctttgtggtgggtggcggaaactacattgagtaccagaacttggtggactac
gccaggtcaaaagcaggcaagaagatcctttacggctgcagtgagctgttcaatgcgtcg
cagttcctcaaacagctctcccagttgggccaaaaatga
DBGET
integrated database retrieval system
