Syngnathus scovelli (Gulf pipefish): 125980845
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Entry
125980845 CDS
T08785
Name
(RefSeq) neurexin 3a isoform X1
KO
K07377
neurexin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125980845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125980845
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
125980845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
125980845
NCBI-ProteinID:
XP_049596371
LinkDB
All DBs
Position
Unknown
AA seq
1523 aa
AA seq
DB search
MDLVSFCIQLQVLLCTCAGLQFLGLPGQWARYLRWDASVRGDLSFQFKTQFSEALLLYFD
DGGYCDFLQLAVAEGRLQLRFGIDCAETTVVSDTRVDDDNWHFAALSRYNLRTVLALDGR
AKADQVRPQRQFMKIVSDLFLGGVPQDIRSGALTLPTVRNMQPFRGAIADLKYGKSQPLF
LGSLKVPLESEGRCTVNPCENGGTCTVAAADGQPLCDCSKTEYEGRFCTREISSKTPGLA
HMKTEQAKSKGTAFSQSFLFGLYEKQRRLLSREENVATFRGSEYFCYDLSQNPIQSSSDE
ITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNSW
HEVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFM
GCLKEVVYKNNDIRLELSRLARVVDHKMKIQGEVSYKCENVATLDPISFETPEAYISLPK
WNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDAAARSQKNTKVDFFAVELLDGSLYLL
LDMGSGTIKVKATQTKVNDGAWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDM
YLGGLPSDRTNLILPTELWTAMLNYGYVGCVRDLFIDGRSKDIRQIAEAQNGAGIKPSCN
KQAGKQCESYPCKNRGACKEGWNRFICDCTGTGYWSRTCEREASILSYDGSMYMKVVMPS
VTHTEAEDVSLRFRSQRAYGLLMATTSRDSADTLRLELDGGRVKLTVNLDGIHPFKGLKP
AARLVNSPTTEPSKTYSWLRPQAKPSQNCIRINCNSSKGPETLYAGQKLNDNEWHTVRVV
RRGKSYKLIVDDDVAEGQMVGDHTRLEFHNIETGVMTERRFVSSIPSSFIGHLQSLRFNG
MLYIDLCKNGDIDFCELNARFGIRSIIADPVTFKSKSSYLSLATLQAYASMHLFFQFKTT
SADGFILFNSGDGSDFIAVELVKGYIHYVFDLGNGPNLIKGKSERALNDNQWHNVAITRD
NSNTHTLKVDAIATIQSINGAKNLDLKGDLFIAGLGPGMYGSLPKLVASREGFQGCLASV
DLNGRLPDLISDALFRSGQIERGCEGPSTTCQEDSCANMGICIQQWENYTCDCSMTSYTG
TQCNDPGTTYIFGKGGGLITFKWPPNERPSTRTDRLTVGFSTSLKDGILVRIDSAPGLGD
FLMLHIQQGKIGVTFNIGMMDISVQESSTPVNDGKYHVVRFTRNGGNATLQVDNWSINEH
FPTGNSDTERVHLASKKIPLKYSRPVEEWLQEKGRQLTIFNTQATVAIGGSDRGRPFQGQ
LSGLYYNTLKVLNMAAESNPNVKINGSVRLVGDVPTGAGSTKSTAVPSDVSTNFIETTTM
MSTTTTRKHRSSSTKHPADDIVSSAECSSDDEDLEECETGHPGGLALPTEAGVRPGPSEV
VRESSSTTGMVIGIVAAAALCILILLYAMYKYRNRDEGSYQVDESRNYITNSAQSNGTVV
KDKQLSSKGSKKKQKNKDKEYYV
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgtgagtttttgtatccagctgcaggtgctcctctgcacatgcgcgggactg
caatttttaggcctaccgggtcagtgggctcgttacctccgctgggacgccagcgtccgc
ggcgatctcagcttccagttcaagacgcaattctccgaggcgctgctgctgtactttgac
gacggcggctactgcgactttctgcagctggccgtggccgagggtcggctccagctccgt
ttcggcatcgactgcgccgaaaccacggtcgtgtccgacaccagggtggacgacgacaat
tggcactttgccgctctcagcaggtataacctgcgcacggttctagcgctggacggacgg
gccaaagccgaccaagtgcggcctcagcgccagttcatgaaaatcgtgagtgacctgttc
ttgggcggagtgcctcaggatatccgcagcggcgcgctcacgctgccgaccgtgcgcaac
atgcagcctttccggggcgccatcgcagacctgaaatacggcaagtcccaacccctcttc
ctgggaagccttaaagtgcccttggagtcggagggccgctgcaccgtcaacccgtgcgag
aacggcggcacgtgcaccgtggcggcggccgacggacagccgctctgcgattgctccaaa
acagaatacgagggccgcttctgcacacgagagatcagcagcaaaacaccaggccttgct
cacatgaagacagaacaagctaaaagcaaaggtacagccttttcccaatctttccttttt
ggcctttatgaaaagcagcggcgcttgctctcaagggaagagaacgtggccacattccgt
ggttctgaatacttctgctacgacctctctcagaacccgatccaaagcagcagcgatgag
atcacgctctcgttcaagacctggcagcgcaacggccttatccttcacactggtaaatca
gccgactacgtcaacttggcgttgaaggacggcgccgtctcccttgtgatcaacttgggt
tccggagcctttgaagcaatcgttgagccggtcaacggcaaattcaacgacaattcctgg
cacgaggtcaaagtgactcgcaaccttcggcaggtaacaatttcagtggatgggatttta
accaccacgggttatacccaagaagactacaccatgcttggctccgatgactttttctac
gttgggggaagcccaagcaccgctgacctgcctggatcacctgtgagcaacaacttcatg
ggctgtctcaaggaggtggtgtacaagaacaacgacatccgcctggagttgtcccgactg
gctcgggttgttgaccacaagatgaagatccaaggcgaggtgtcctacaagtgtgaaaat
gtggctacgctggaccccatttcttttgagactccagaggcctacatcagcttacccaag
tggaataccaagcggatgggatccatctctttcgatttccgcaccaccgagcccaacggc
ctcatcctcttcacccacggcaaaccgcaagagcgcaaagatgcggcggccaggagccag
aagaacaccaaggtggatttctttgctgttgagctgttggatggaagtctgtacctgctg
ttggacatgggctcaggaaccatcaaggtgaaggccactcaaacaaaggtcaacgacggc
gcctggtatcacgtggatatccagagagacggtcgctcaggtaccatctctgtcaacagc
agaaggaccccattcaccgcaagcggcgagagcgaaatccttgacctggaaggcgacatg
tacttgggggggctccccagcgatcgcaccaacctcattttgcccaccgagctgtggacg
gccatgctcaactacggctacgtgggctgcgtgcgcgatctctttatcgacgggcgaagc
aaagacatccgtcagatcgccgaggcgcaaaacggtgccgggattaagccttcctgcaac
aagcaagccggcaagcagtgcgagagttacccctgcaagaaccgaggcgcctgcaaagaa
ggctggaatcgattcatctgcgactgcaccggcactggttattggtctcgcacttgtgag
agagaggcctccatcctctcctacgacggcagcatgtatatgaaagtagtgatgccaagc
gtcacgcacactgaggcagaggacgtgtctctgcgttttcgctcgcagagggcttacggc
ctcctcatggccaccacctcccgagactcggccgacacgctcaggctggagttggacgga
ggccgcgtcaaactcaccgtcaatctagatggtattcaccccttcaaaggccttaagcct
gcggcccgtctggtgaacagcccgacaacagagcccagcaaaacctacagctggctgcga
ccccaagccaagccaagccaaaactgtatcaggataaactgtaactccagcaaaggaccg
gagacgctgtatgccgggcaaaagctcaatgataacgaatggcatacggtacgggtggtg
cgtcgcggcaaaagctacaagctaatcgttgacgatgatgtagcagaaggccaaatggtg
ggtgaccacacacgtctggagttccacaacattgaaacgggcgtgatgaccgagcgcaga
tttgtttccagcatcccgtccagcttcattggccatctgcagagcctcagattcaatggc
atgctctacatcgacctgtgcaaaaacggcgacatcgatttttgcgagctcaacgcccgc
tttgggatccgttccatcatcgctgacccggtcacctttaaatccaagagtagctatctg
agcctggccaccctccaggcctacgcgtccatgcacctcttcttccagttcaagaccacc
tcggccgacggcttcatcctattcaactcgggagacggcagtgattttattgccgtagag
ctggtgaaaggatacatccattatgtgtttgacctgggaaacgggcccaatttgatcaag
ggcaaaagtgaaagagccctgaatgacaaccagtggcacaacgtggccatcacccgagac
aacagcaacactcataccctcaaagtggatgcgatagccacaattcagagcatcaacggg
gccaagaacttggacctgaaaggcgaccttttcatcgctgggttgggtcctggcatgtat
ggtagtcttcccaaactggtggcctccagagagggtttccaaggctgcttggcttcagtg
gacctcaacgggcgtctgccagacctcatcagcgacgccttgtttcgtagcgggcagatt
gagcgtggatgtgaaggtcccagcaccacctgtcaggaggactcgtgtgccaacatgggg
atttgcatccagcagtgggagaactacacgtgtgattgctccatgacctcctacactggg
acgcagtgcaatgaccctgggaccacctacatctttggcaaaggaggaggcctcataacg
ttcaagtggccgcccaacgagagaccgagcaccaggaccgacaggctgactgttggcttc
agtacttcgctcaaagacggcatcctcgtcaggatcgacagcgctccgggtctgggggac
tttctcatgcttcacatacaacaaggcaaaattggcgtgacgttcaacattgggatgatg
gatatcagcgtccaagagagcagcaccccggtgaatgatggaaagtatcacgtggtccgc
ttcacccgaaacggtggcaacgcgacgctgcaggttgataactggtccatcaacgaacac
ttcccaacagggaacagtgacactgaacgggttcacttggccagtaagaaaattcctttg
aagtactccaggccagtagaagaatggctccaagaaaaaggacgccagctaaccatattc
aacacccaagccacggtggcaatcggcggaagcgatcgtgggcggccgtttcagggccag
ctctctggtctttattacaataccctcaaggtgctgaacatggctgcggagagcaacccc
aatgtcaagatcaatgggagcgtgaggctggtgggcgatgtccccacaggggcaggctcc
accaagtccactgccgtgccttcagatgtctccactaacttcattgagaccactaccatg
atgtccaccaccaccacgcggaagcacaggtcctcttcaacgaagcatccagcagatgac
atcgtgtcatctgccgagtgttccagcgacgatgaagacctggaggagtgtgaaacgggt
catccaggtgggctagcacttcccacagaagcaggcgtcaggccggggccttcggaagta
gtccgggaatcaagcagcaccaccgggatggtcatcggaatagtggcggccgccgccctg
tgcatcctcatccttctttatgccatgtataagtacaggaacagggacgaaggctcctac
caggtggacgagagcaggaactatatcaccaactcggcacagagcaacggtaccgtggtc
aaggacaaacagctgagctccaaaggcagcaagaaaaagcagaagaacaaggataaggag
tattacgtgtga
DBGET
integrated database retrieval system
