Syngnathus scovelli (Gulf pipefish): 125980937
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Entry
125980937 CDS
T08785
Symbol
sptb
Name
(RefSeq) spectrin beta chain, erythrocytic isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125980937 (sptb)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125980937 (sptb)
Intermediate filaments
Intermediate filament-binding proteins
125980937 (sptb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Ribonuc_L-PSP
Motif
Other DBs
NCBI-GeneID:
125980937
NCBI-ProteinID:
XP_049596567
LinkDB
All DBs
Position
14:complement(13629845..13646351)
Genome browser
AA seq
2355 aa
AA seq
DB search
MTSTTDFDNVEITQQYSRINTRFDLPDEELDNDNSSARLFERSRIKALADEREAVQKKTF
TKWVNSILSRVSCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIIVETGQADQKETRSAKDA
LLLWCQMKTAGYSSVNITNFTTSWKDGMAFNALIHKHRPDLVDFNQLKRSNPTHNLQSAF
NVAEKHLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKQLAVEGKRVGKVLDHAI
ATEKMVNKYETLASELLAWIEQTILVLNNRKLANSLSGVQQQLQAFNTYRTLEKPPKFQE
KGNLEVLLFTIQSRMRANNQKVYTPTEGALVADINRAWERLERAEHERERVLRDELIRQE
KLEQMARRFDRKAAMRETWLLENQRLVAQDNFGYDLPAVEAAKKKHDAIETDIAAYEERV
QGLVNISEELEAERYHDAKRVDARKDNVLRLWDYLQELLKARRGRLDKNVTLQKIFQEML
YIISWMDDMKVRLLSSDIGKHLLEVEDLLQKHALLEKDVALQADRVQNAGAAALKFANGE
SYKPCDPQVIRDRVEHLELCYQELLDLAAQRRAQLTQSRRFWSFLWEAAELESWIKEKEN
LFSSLDYGKDLTSVLVLQSKHSAFEDELGARRANLQKLLTEGDEMIKENHFGAPVIRERT
DSVEGQWQQLEDLAAFRKQNLQDTQRFFQFQGDADELMAWLLDAKRQMSSDDTGHDEYTT
QRLVRRHDDLCNETAKTAVTVDALSKQANGLPEELLNTPDIQRRLKDIKELFMELMSLAD
VRQKKLDDAMALYTIFSETDACELWMGQKETWLVDLGVPDKLEDLEVVQNRLSILAQDMA
NVQSRVDNVNKAVKQLEDSRHPRIKDVKECQTRLNKRWDAFKAMVEDKKRKVDSTVSLNN
FGLECDETAAWIRDKTRVIESTQDLGNDLAAIMTIQRKLYGMQRDLAAIENKLQLLGAEA
NRLAAENPENAPGILARRAQLDPAWDELQKTLKDLEESLGEVSKLQSFLQDLDDFQSWLF
RAQKAVASEEMPASLPEAEEQLSLHDAVRDDIDGHVEDICAIRDTGAQVTLGLEDDPQYR
ELVQTLGGLDRGWYELQKMWDRRKNFLDQCLGFQQFLRDSKAVEAILNNQEYTLAHVDKP
DTLDGAEQALKKHEDSLSTMEANEEKIDGALQVGRQLVDGGNLYAGKVQDKMDSISDRHN
KNQARAQEVSEKLRDNRDLQHFLQNTQDLTVWINEKMLTAQDTSYDEARNLHSKWLKHQA
FMAELASNKDWLDKVDQEGQELMTSKPELEPVVRDRLATLHQLWEMLESTTQEKARLLFD
ANRSELFDQSLADIRKWLGEMQQQLQSGASDDGSGGQDVKDLTNANILLKKHQVMENQVR
DRARELDELQEALRTHGGGGGGGDEQQQPGQPELEVEQQNLQVQFQQLIAPLAQRRGKLE
AAKAVHQFNRDLADELLWIDERMPLALSEDHGNDLQTVQMLLKRNQTLQKEIEGHQPRVD
EVLERGRGMAAAGEGGGPEAERLAEQVAQLEEAWPQLREQMTQRKDRLDASHRAQQFYND
ADEAQAWIGEQELYMIAEEKPKDEQSAMLSLKRHNIVKQAVDDYADTIRSLSERAQNMLA
EDHPDGEKVIRRQGQVDKQYANLSELAEERRRKLEHTYHHFLLSREVDDLEQWISERDVA
ASSQEMGQDLDHVTLLRDKFREFARETGAQGQKRVDAVNRTIDELIEAGHGEAIAMAEWK
DTINESWADLLELIDTRAQLLSASYELLKYFVDGKELVVQIGDKQKELPEDVGDDFSKAE
SFHRMHAAFERDLTSLGKQVEQVQETAGQLRAQYAGERADGIQAQEREVVEAWRALLDAC
DGRRKQLLDTAHKFRFYAMVRDLTAWMESIIQQIDTQEKPRDVSSVEFLQKYHQGIRSEI
EARGAKFTECMDLGTALLARKHKDSAEIQEKMVQLGDKRQEMMFKWDDRWDWLRLLLEVC
QFARDASVAEAWLVAQEPYVSSRDVGQSVDEVEKLLKRHEAFEKSTAAWEERFSALERLT
TLELLELRKQQQEMEQFLQDQQRYEQESRREDTGFAESSQLFTVEEETLSGMAEPSSGFP
EGTATVESQMRESGSLELEASISAVGKETERAATLPAQTVLLEGMLGRKQGAGGSGKKVS
SRSWNNLYCVLKPGQLAAYKDAKSFGQGASFHGEEALALTNASWELLANYKKKKHVGKLC
LEDGSEYLFHCKDEEDLQHWSQAMARAIPSPADEGGPSGATSHSLPPPASSSSASPGPIA
KKDKEKKFGRFAKKK
NT seq
7068 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccacggactttgacaatgtggagatcacgcagcagtacagtcgcatcaac
actcgcttcgatctccccgacgaggagctggacaacgacaacagctcggccagactcttt
gagcgctcacgaatcaaagctcttgcagacgagcgcgaggcggtgcagaagaagacgttc
accaagtgggtcaactccatcctgtcacgagtcagctgtcgcatctccgacctttacttg
gacctgcgtgatggacgcatgctcattaaacttttggaggtcttgtccggagaacgattg
cccaagccaaccaagggcaggatgcgcatccactgtttggagaatgtggacaaggcgctg
cagttcctcaaggagcagcgcgtccacttggagaatatgggctcgcacgacatcgtggac
ggtaaccaccgcctcatcctcggcctcatctggaccatcatcctccgcttccagatccaa
gacattattgtggagacgggccaggccgaccagaaggagacgcgctcggccaaggacgct
cttcttctgtggtgccagatgaagacagcaggttattccagtgtgaacatcacaaacttc
accacgagttggaaagacggcatggccttcaacgctctcatacacaaacatcgaccagat
ctggtggacttcaaccagctgaagaggtccaacccgacgcacaacctccaaagcgctttc
aacgtggccgagaagcacctgggcgtcaccaagctcctggacccggaggatgtgttcacc
gagaacccggacgagaagtccatcatcacgtatgtggtggccttctaccactacttctcc
aagatgaagcagctggccgtggagggcaagcgggtgggcaaagtcctggaccacgccatc
gccaccgagaagatggtgaacaagtacgagaccctggcctcggagctgctggcttggatt
gagcagaccatcctggtgctcaacaaccgcaaactggccaactcgctgtctggcgtccag
cagcagctccaggccttcaacacctacaggacgttggagaagccgcccaagttccaggag
aaaggcaatctggaagtgctgctctttaccatccaaagccgcatgagggccaacaaccag
aaggtctacacgcccacagaaggagcgctggtcgccgacatcaacagggcctgggagcga
ctggagcgcgccgagcatgagcgcgagcgagtcctgagggacgagctgatccgccaggag
aaactggagcagatggccagaagatttgaccgcaaggcagccatgagggagacttggctt
ctggagaaccagcgattggtcgcgcaggacaactttggctacgacctgccggcggtggag
gcggccaagaagaagcacgacgccatcgagacggacatcgccgcctacgaggagcgcgtc
cagggcctggtgaacatctctgaggagttggaggccgaacgctaccacgacgccaagcgg
gtggatgcccgcaaggacaacgtcctgcgcctgtgggactacctgcaggagctgctcaag
gcccgcagggggcgactggacaagaatgtgacgctgcagaagatcttccaggagatgctc
tacatcatcagttggatggatgacatgaaggtccggctgctgtcttctgacattgggaaa
catttgttggaagtggaagacttgttacagaaacacgctttgctcgagaaagacgtcgcc
ttgcaagccgaccgagtccagaacgccggcgctgccgctctcaagttcgccaacggagaa
agttacaagccgtgcgatccccaggtgatccgagaccgggtggagcatttggagctgtgc
taccaggaactgctggacctggccgcccagcgccgagcccagctgacgcagtcacgtcgc
ttctggagcttcttgtgggaagcggcggagctggagagctggatcaaggagaaggagaat
ctcttctcctcactggactacggcaaggacctgaccagcgtgctggttctccagagcaag
cacagtgccttcgaggacgagctgggtgctcgccgagccaacctgcagaagcttctgacc
gaaggcgacgagatgatcaaggagaaccactttggtgcgccggtgatccgagagcgcacg
gatagcgtggaggggcaatggcagcagctggaggatctggccgccttccgtaaacagaac
ctgcaggacacgcagaggttcttccaattccaaggggacgccgacgaattaatggcctgg
ctgctggacgccaagcggcagatgagcagcgacgacaccggccatgacgagtacaccacc
cagcggctcgtgcggcgccacgacgacctgtgcaacgagaccgccaagacggccgtcacc
gtggacgccctgtccaagcaggccaacggattacccgaggagctgctgaacacacccgac
atccagcgccgcctcaaagacatcaaggagctcttcatggagctcatgtcccttgccgac
gtcaggcagaagaagctggatgacgccatggcgctctacaccatcttcagcgagacggac
gcctgtgagctctggatgggccagaaggagacttggctggtggatttgggggtgcctgac
aagctggaagacctggaagtggtccagaataggttgagcattttggctcaggacatggcc
aacgttcagtcgagagtggataacgtcaacaaggcggtgaaacagttggaggacagcaga
caccctcgcataaaagatgtcaaggaatgccagaccagactcaacaaaaggtgggacgcc
ttcaaggctatggtggaggataagaagaggaaggtggactccacggtcagcctgaacaac
ttcggactggagtgcgatgagaccgcagcttggatccgagacaagacgcgtgtgatcgag
tccacgcaggacctgggcaacgacctggccgccatcatgaccatccagaggaagctgtac
ggcatgcaacgcgacttggctgccatcgaaaacaagctccagctcctgggggccgaggcc
aaccggctggcggcggagaatccggagaacgcgccgggcatcttggcccgccgggcccaa
ctggacccggcctgggacgagctccaaaagaccctgaaggacctggaggagtcgttgggc
gaagtcagcaagctgcagtcgttcctgcaggacctggacgacttccagtcgtggcttttc
agggctcagaaggccgtggcctccgaggagatgcccgcctcgctgcccgaggccgaagag
cagttgagcctccacgacgccgtgcgcgacgacatcgacggccatgtggaggacatctgt
gccatcagggataccggcgcgcaggtcacactcggcctggaggatgacccgcagtatcgg
gagctggtgcagacgctcggcggcctggaccgaggctggtacgagctccagaagatgtgg
gaccgacgcaagaactttctggatcagtgtctgggcttccagcagttcctaagggatagc
aaggcggttgaggccatcctcaacaaccaggagtacacgttggcccacgtggacaagccc
gacactctggacggcgccgagcaagccctgaagaaacacgaggactctttgagcaccatg
gaggccaacgaagaaaaaattgatggcgctctccaggtgggccgacaactggtggacggc
ggcaacttgtatgcaggaaaagtgcaggacaaaatggactccatcagtgacaggcacaac
aaaaatcaagcgagagcccaggaggtgtcggagaagctgcgagacaaccgtgacttgcag
cactttttgcagaacactcaggatctgaccgtgtggatcaatgagaagatgctgaccgct
caggacacgtcttacgacgaggcccgcaacttgcacagcaagtggctgaagcaccaggcc
ttcatggccgagttggcctccaacaaggactggttggacaaagtagaccaggagggtcag
gagctgatgacttccaagcccgagttggagccagtggtgcgggaccgcctggccaccctc
caccagctgtgggagatgttggagtccaccacgcaggagaaagctcggctgctgttcgac
gccaaccgctctgagctgtttgaccagagcctggcggacatcaggaagtggctgggtgag
atgcagcagcagctccagagtggggccagcgatgacggcagtggcggccaagatgtcaaa
gacctgaccaacgccaacatcttgctcaagaaacatcaggtgatggagaaccaagtgcgg
gatcgcgcccgggagctggacgagctccaagaggcgctcaggacgcacggcggcggtggt
ggtggaggtgatgaacagcagcagcccgggcaacctgagctggaagtggagcagcagaac
ctgcaggtccagttccagcagcttatcgcccccttggcccagcgcaggggcaagctggag
gcagccaaggccgtgcatcagttcaacagagacctggcggacgagctgctgtggattgac
gagagaatgccgctggcgctgtcggaagatcacggcaacgacctgcaaacggtgcagatg
ctgctcaagaggaaccagaccctgcagaaggagattgagggccaccagccccgcgtggac
gaggtgctggagcgaggacgcgggatggcggcggcgggcgagggcggcggccccgaagcc
gagcggctggccgagcaagttgcccagctggaggaggcttggccgcagctgcgggagcag
atgacgcaacgcaaggacaggttggatgcctcgcatcgagcgcagcagttctacaacgac
gcagacgaggcccaagcctggatcggcgaacaagagctctacatgatcgccgaggaaaag
ccaaaggacgagcagagcgccatgttgagtctcaagcgtcacaacatcgtcaagcaggcc
gtggacgactacgccgacaccatccgcagtctgtccgagcgagctcagaacatgttggcg
gaggaccatcccgacggcgagaaggtcatccgacgtcagggccaggtggacaagcagtat
gccaatctgagcgagctggctgaggagcggcgcaggaagctggagcacacctaccaccat
ttcctgctcagccgtgaggtggacgacctagagcagtggatctccgagcgcgacgtggcc
gcgtcctcgcaggagatggggcaggacctggaccacgtcacgctgttgagggacaagttc
cgtgagtttgctcgcgagacgggcgcacagggtcagaagcgcgtggacgccgtcaaccgc
accatcgacgagctgattgaagcaggccacggcgaggccatcgccatggccgagtggaag
gataccatcaacgagagctgggccgacctcctggagctcatcgacacgcgcgctcagctg
ctcagcgcctcctacgagctgctcaagtactttgtggacggcaaggagctggtggtccag
atcggcgacaagcagaaagagctacccgaagacgtgggcgacgacttcagcaaagccgag
tccttccacaggatgcacgccgccttcgaacgtgacttgacctccctggggaagcaggtg
gagcaagtgcaggagacggcggggcagctgcgcgctcagtacgcgggcgagcgcgccgac
ggtatccaggcgcaggaacgtgaggttgtggaggcctggcgggctttgctggacgcctgc
gacgggcgccgcaagcagctgctggacacggcccacaagttccgcttctacgccatggtg
cgtgacctcaccgcctggatggagagcatcatccagcagatcgacacccaggagaagccg
cgggacgtgtcatcggtggagtttctccagaagtaccaccagggcatccgctccgagatc
gaggcgcggggggccaagttcaccgaatgcatggacctaggcacggccctgctggcgcgc
aagcacaaagactctgctgagattcaagagaagatggtgcagctgggggacaaacgtcag
gagatgatgttcaagtgggacgaccgctgggactggctacgacttttgttggaggtgtgc
cagtttgcacgcgacgcctcggtggctgaggcctggctggtggctcaggagccgtatgtg
agcagcagggatgtcggccagtcggtggacgaggtggagaagctgcttaagcgccacgaa
gcctttgagaagtccaccgccgcctgggaggaacgcttctctgccctggaacgcctcacc
accttggagttgttggagctgaggaagcagcagcaggagatggagcagttcctgcaagac
cagcagcgctacgagcaagagagcaggagagaagacacaggatttgctgagtcgtcacaa
ctcttcacagtggaggaagaaacgctgtccggcatggctgagcccagttcgggcttcccc
gaagggacggcgaccgtggaatcccaaatgagggagagcggctctctagagctggaggca
tccatttcggcggtgggcaaggagacagagcgggcggccaccttgcccgcccagacggtg
ctgctggagggtatgctgggtcgtaagcagggcgcaggaggatctgggaagaaggtgtcc
agtaggtcgtggaacaacttgtactgcgttctgaagcccggtcagctggcagcctacaaa
gacgccaaaagcttcgggcaaggcgccagctttcacggcgaggaagcgctggccttgacc
aacgccagctgggagctgctcgccaactataagaagaagaagcacgtgggcaaactatgt
cttgaagacggcagtgagtatttgttccattgtaaagacgaggaggaccttcagcattgg
agccaggccatggcgagggccattccatcgcccgcggatgaaggggggccctcgggggcc
accagccatagcctgcccccgcctgcctcctcctcctcagcctcacctggccccattgct
aagaaagacaaggagaagaagttcggccgctttgcaaaaaagaagtga
DBGET
integrated database retrieval system
