Syngnathus scovelli (Gulf pipefish): 125980958
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Entry
125980958 CDS
T08785
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125980958 (stxbp5b)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125980958 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
125980958 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Lgl_C
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Synaptobrevin
EIF3I
Beta-prop_VPS8
WD40_like
Motif
Other DBs
NCBI-GeneID:
125980958
NCBI-ProteinID:
XP_049596634
LinkDB
All DBs
Position
14:complement(13050441..13063991)
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AA seq
1191 aa
AA seq
DB search
MKKFNIRKVLDGLTSSSSSAAHTGAAKENDAVPESLQSEHFQLCKTVRHGFPHQPSSMAF
DPVQKILAVGTLNGALRLFGRAGVECYCQHESGAGVIQLQFLINEGALVSALADDSIHLW
NLRQKIPAILHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIMWNK
AIELSTKTHPGPVVHISDNPMDEGKLLIGFECGVVVLWDLKSKKADCRYNYDEAIHSVDW
HHEGKQFVCSHSDGTLTTWNIRTPAKPTQIITPHGKQPKDGKKPEPCKPILKVEYKTTRA
GDPFMVLSGGLSYDTVGRRACLTVMHGKSTAVLEMDFPIVDFLTLCETPYPNDFQEPYAV
VVLLERDLVVIDLGQIGYPIFENPYPLSIHESPVTCCEYFADCPAELIPALYSVGSRQKR
QGYSKKDWPINGGNWGQGTQSYPEIVITGHADGTIKFWDASALMLQVLYKLKTAKVFERA
RGKEEKANTDIVDEDPFAIQTLCWCPESRMLCVAGVSAHVIVYRFSKQEAAAANVQLLEV
RMQCELSDTDSPDTGGEQTPTQASSVPPSPQEGDAPATASNQPSAGGNGSNPSSDGHRDN
MPCLQVRGSPLKQSPGYQVELVVQLVWVSGEPPQPITSLAINSSYGLVVFGNSNGMAVVD
YLQKTLLLNLGTSELHGASEPYQRQPCSPRKARQPSGALCDSSDGPNAAEERCKSPNSGS
TSPCNSDDERKAKFMKKVKYKSRRFSKTVANDFARMSRKISSSNEHKPNTECHSSPSRKR
FYYTHTGTPTSSRKSVKLAFPTANSDHNMNSKDISFNRSRSSSVTSIDRESREAVCAFCF
CETFPRKSTDGVPGPCVLVGTSQGSVMLLAISLPPGDDQRLIQPVGISSCGTVARLKGGI
LTMALLDAAGAALPASYEPWYDPNASDEEKEKERSRWRRPASPPSSQEGHDSQFAVLCSE
KQAKVVAMPSQTRVHKHNITESSFVLRADVVQMAGANCIACFCANGHIMTLSLPSLRPLL
DVNYLPLTDMRIARTFCFSNLGQALYLTSPMEVQRITYSQETCDNLQEMLSELFTPVETP
EAPNRGFFKGLFGGGAQSLDREDLFGETASGKASRSLAQHIPGPGNMEGMKGAASGVVGD
LARARVALDERGQKLGELEERTAAMMSSAESFSKHAHDMMQKYKDKKWYQL
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacattcgtaaggtgctggacggcttgacgtcgtcttcgtcctcggct
gcgcacactggggccgccaaggagaatgacgccgtcccggagagcctgcagtcggagcat
ttccagctttgcaagactgtgcgtcatggcttcccacatcagccgtcctccatggccttc
gaccccgtgcagaaaatcttggctgtcgggacacttaacggagctttgaggctcttcggt
cgggcaggtgtggaatgttactgccaacatgaaagtggcgccggcgtcatccagctccaa
tttctcatcaatgagggggcactagtgagcgccttagctgatgacagcatccacctgtgg
aacctgaggcaaaagattcccgccatcctgcattcgctcaaattcaacagggagagaatc
acgtactgccacctgcccttccagagcaagtggctttacatcggcacggaacgaggcaac
atccacatcgtcaacgtggagtccttcaccctctcaggctacgtcatcatgtggaacaaa
gccatcgaactatccaccaagacacacccagggcctgtagtgcacatcagtgataacccc
atggatgaaggaaagctcctcattggatttgagtgcggcgtggtggtgttgtgggacctc
aagtccaaaaaagctgactgccgctacaactatgatgaggccatccactcggtcgattgg
caccacgagggcaagcagttcgtctgcagccactccgatggcactctgaccacttggaac
attcgaacccctgccaagcccacgcagatcatcacgccgcatggaaagcagcccaaggat
ggcaaaaagccagagccgtgcaagcccatcctgaaggtggagtacaaaaccacacgggct
ggagacccgtttatggttctgtccggcggtctgtcctacgacacggtgggccggagagcc
tgtctgacggtgatgcacggcaagagcaccgccgtcctggagatggacttccccatcgtg
gatttcctcacactgtgcgagacgccgtatcccaacgattttcaggagccgtacgccgtg
gtggtcctcctggagcgggatttagtcgtcatcgacctcggacagatcggctacccgata
ttcgagaatccttaccccctaagcatccacgagtccccggtgacctgctgcgagtacttt
gccgactgccccgccgaactcattcccgcactttactcagtgggcagccgacagaagagg
caaggctacagcaagaaggattggcccatcaacgggggaaactggggacaaggcacgcaa
agttaccctgagatcgtcatcaccggacacgctgacggcactatcaaattttgggatgct
tctgcattgatgctccaagtgctgtacaagctgaagacggccaaggtgttcgagagagcc
cgcggcaaggaagagaaagccaacacggacatcgtggacgaggatcccttcgccatccag
acgctgtgctggtgcccagagagcaggatgctgtgcgtggccggcgtgtcggcgcacgtc
atcgtctaccgcttcagcaagcaggaagccgccgccgccaacgtgcagctcttagaggta
cgcatgcaatgcgagctgagtgacaccgactcgcccgacaccggcggcgagcagaccccc
acgcaggcttcctcggttccccccagcccccaggagggcgacgcccccgccacagcctcc
aatcaaccctccgccggcggaaacggcagcaatccttcgtcggacgggcaccgagacaac
atgccctgccttcaggtgcgcggctcccccctgaagcagtctccgggctaccaggtggag
ctggtggtgcagctggtgtgggtgagcggggagcctcctcagccgatcaccagcttggcc
atcaactcctcgtacggactggtggtgtttggtaacagcaacggcatggcagtggtggac
tacctccagaaaacgctgctgctcaacctcggcacgtcggagctgcacggcgcgtcggag
ccctaccagaggcagccttgctccccgcgtaaagcccgccagccctccggagcgctgtgc
gattccagtgacgggcccaacgccgcagaagaacgctgcaagtctcccaactcaggatcc
acctcgccctgcaattctgatgatgagcgcaaggccaagtttatgaaaaaggtgaagtac
aaaagcaggcgcttttccaagacggttgccaatgactttgctaggatgtcgcggaaaatt
agctcgtctaatgagcataaaccaaacacggagtgccattccagcccgtccaggaaacgc
ttttattacacccacaccggcacgcccacatcaagccgcaagagcgtgaagttggctttc
cccacagcaaactcagaccataatatgaattccaaggacatctcattcaaccgctcgcgt
agctccagcgtgaccagcatcgacagggagtcccgcgaggccgtctgcgccttctgcttc
tgcgagaccttccccaggaagtcgactgacggcgtgccaggcccctgtgtgctggtgggc
accagccagggctctgtcatgttgctggccatcagcctgccacccggcgacgaccagagg
ctcattcagccagtcgggatctcctcctgcggaacggtggccagactcaaaggaggcatc
ttaacaatggccctgctggacgccgccggagcggcgctgcccgcctcctacgagccatgg
tacgatcccaacgcctcggacgaggagaaagagaaggagaggagccggtggcgccggcca
gcgtcgccgccttcgtcgcaggaaggtcacgactcgcagttcgccgtcctgtgctcggag
aagcaagccaaggtggtggccatgccgtcccagacccgagtccacaaacacaacatcacc
gagtcatccttcgtgctgagggccgacgttgtgcagatggccggagccaactgcatcgcc
tgcttctgcgccaacggacacatcatgacactcagcttgccgagtctgcggcccctcctg
gacgtcaactacctgccgctgacggacatgcggatagcgcggaccttttgcttctccaat
ctggggcaggctctgtacctcacctcgcccatggaggtgcagaggatcacctacagccag
gagacctgtgacaacttgcaggagatgctgagtgagttgttcacaccagtggagacccca
gaagctcccaaccgaggtttcttcaaaggcctctttggtggaggagctcagtctctggat
cgggaagatctcttcggcgaaacggcgtccgggaaggcttctcggagcctggcccaacac
atccccggcccgggcaacatggaaggcatgaagggcgcggcgtcgggcgtggtcggcgac
ctggcccgcgcgcgggtagcgctggacgagcgaggccagaaactgggcgagctggaggag
aggacggccgccatgatgtctagcgccgagtccttctccaagcacgctcatgacatgatg
caaaagtacaaagataagaagtggtaccagctctga
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