Syngnathus scovelli (Gulf pipefish): 125980962
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Entry
125980962 CDS
T08785
Symbol
pld1a
Name
(RefSeq) phospholipase D1a
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00564
Glycerophospholipid metabolism
sscv00565
Ether lipid metabolism
sscv01100
Metabolic pathways
sscv04144
Endocytosis
sscv04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
125980962 (pld1a)
00565 Ether lipid metabolism
125980962 (pld1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125980962 (pld1a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125980962 (pld1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125980962 (pld1a)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
125980962 (pld1a)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
125980962 (pld1a)
Endosome - Golgi transport
Others
Others
125980962 (pld1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
DBD_HTH
DUF3785
Motif
Other DBs
NCBI-GeneID:
125980962
NCBI-ProteinID:
XP_049596645
LinkDB
All DBs
Position
14:13421053..13432266
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AA seq
1046 aa
AA seq
DB search
MMAKAPPTSSRVNLVNGESSDVTVTDGIIMADLVESLDTRELDFDEGEEVDCEGNSLGDC
RIPFSAVYATVGFKEASATVFLPTVPITVRILEVERFTTAQDRFNLSHHRSVNKSLPAVF
KIEMKHGEFTWMVKRKEKHFMDLHRELRTYKTFMRIPLPSRSHTVKRRTVRKSEVTEMPS
LPRGGGDELVRDEQVSSRRRQLEDYLNKLLKMALYRKYHHTMEFIDVSQLSFIHDLGPKG
LEGMIYKRSGGHRIPGMNCCGHTQACYRWSKRWLVVKDSFLLYMKPDSGAISFVLLVDKE
FSIKMDSKDTETKHGVRIDSLCRTLVFKCSSYRHARWWGQSIENFVQNNGKAFLRDHRFG
SFAQEQENIPAKWYVNGKTYMEDVADALEEAREEIFITDWWLSPEIFLKRPVVEGNRWRL
DCILKRKAQQGVRVFVMLYKEVELALGINSGYSKRTLMRLHPNVKVMRHPDHVSSSVYLW
AHHEKIVVVDQSIAFVGGIDLAYGRWDDREHRLTDVGSVTRSVALEQAAQSNKAPPHVDG
ASQSNGRGTPAADPAELPRLKGVGRSRRARFSLSRRLHKHTLQHSDSVSSADSSESGSVQ
SLKTGVGELQGNTRFWHGKDYCNFVYKDWIQLERPFDDFIDRYTTPRMPWHDIASVVHGR
AARSVARHFIQRWNFTKIMKPKYRSLSYPFLLPKSHATATELRYQVPDCVNAKVQVLRSA
ADWSAGIKYHEESIHNAYIQVIAKSKHYIYIENQFFISCADNRTVYNKIGDAIIERILRA
HKEGKKYRVYVVTPLLPGFEGDITTGGGNAIQAVMHFNYRTMSRGEYSIISQLKKELDDH
WMNYISFAGLRTHVELEGRLMTELIYVHSKMLIADDNTVIIGSANINDRSMLGKRDSEVA
VIVEDTEKVASVMDGHEFEAGPYALGLRLECFRTILGGHDDATIDLSDPISDRFYKEVWM
TTAGRNATIYEKVFRCLPSSLVRNMSELEQYQSKPGLAQTDQARAQEELRKIRGFLVQFP
LDFLSEHNLMPSVGTKEAMVPTEIWT
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgatggccaaggctccgcctacgagcagcagagtcaatctggtgaacggcgaaagttcg
gacgtcacggtgacggacggaatcattatggccgatctggtggaaagcttggatacccga
gagctggacttcgatgagggggaggaggtggactgcgagggaaacagcctcggggactgc
cgcatcccgttctcggccgtgtacgccacggtgggcttcaaggaggccagcgccacggtc
ttcctgcccacggtgcccatcaccgtccgcatcctggaggtggagcgcttcaccacggcg
caggatcgcttcaacctgtcgcatcaccgcagcgtcaataaatctctacccgccgtgttc
aagattgagatgaagcacggcgagttcacctggatggtgaagaggaaggagaagcacttt
atggatctgcatcgagagctgcggacgtacaaaaccttcatgaggataccgctgccgtcg
cgcagccacacggtgaagaggaggacggtgaggaagagcgaggtgacggagatgccctcg
ctgcccaggggcggaggtgacgagctggtgcgggacgagcaggtgtccagccggcggaga
caattggaggactacttgaacaagctgctgaaaatggctttgtaccgcaaataccaccac
accatggagttcattgacgtcagccagctgtccttcattcacgacctgggccccaaagga
ctggaagggatgatatacaagcgctccgggggtcatcgtatccccggcatgaactgctgc
ggtcacactcaagcctgctaccgctggtccaaacggtggctggtggtgaaggactcattc
ctgctgtacatgaaacctgattcgggggccatctcttttgtcctgctggtggacaaagag
ttcagcatcaagatggactccaaggacacagagaccaaacacggggtcaggattgacagt
ctttgcaggacgctggtgttcaagtgcagcagctacagacacgcccgctggtggggtcag
agcatcgagaactttgtccagaataacggcaaggcctttctgcgtgatcaccgctttgga
tcctttgcgcaggaacaggaaaacattccagctaaatggtacgtgaatggcaagacttac
atggaggacgtagccgatgccttggaggaggccagagaagaaatcttcatcaccgactgg
tggctgagtccagagatcttcctcaagagacctgttgtggagggaaaccgctggaggctg
gactgcatcctcaagcgaaaagcccaacaaggagtgcgcgtctttgtgatgctgtacaag
gaggtggagctggcattgggcatcaattcgggctacagcaagcgaacgctcatgcgcctg
caccccaacgtcaaggtgatgcgccatccagaccacgtgtcctcctccgtctacctgtgg
gcgcatcacgagaagatcgtggtggtcgaccaatcgattgctttcgtgggcgggatcgac
ctggcgtacggtcgctgggacgacagggagcaccggctgacggacgtcggcagcgtgacc
cgttccgtggcgctcgagcaggccgctcagtccaataaggcgccgccgcatgtggacggc
gcgtcgcagagcaacggtcgggggacacccgccgcagacccggcggagctgcccaggctg
aagggcgtcgggcgcagccggcgcgctcgcttcagcttgtctcggcgcctgcacaagcac
accttgcagcacagtgacagcgtcagcagcgcggacagctcggagagcggctcggtgcaa
agccttaaaacgggtgtaggagagttgcagggaaacactcgcttctggcatggaaaagat
tactgcaactttgtctacaaggactggattcagctggaaagaccttttgacgacttcatc
gaccgctacaccactcccaggatgccgtggcatgacatcgcctcggtggtgcacggcaga
gccgctcgctccgtggcccgacacttcattcagcgttggaacttcaccaagatcatgaag
ccaaagtaccgctctctgtcttatcccttcctgctgccaaagtctcacgccaccgctact
gagctccgataccaagtgcccgactgtgtgaatgccaaagtgcaggtcttgcgctcagca
gccgattggtcggccggcataaagtaccacgaggaatccatccacaacgcatacatccaa
gtcattgccaagagcaaacactacatctacatcgagaaccagttcttcatcagctgcgcc
gacaaccgcacggtgtacaacaagatcggagacgccatcatcgagaggatcctcagagcg
cacaaagaaggcaagaagtatcgcgtgtacgtggtgactccgttgcttcccggcttcgag
ggggacatcaccaccggcggggggaacgccatccaggcagtcatgcactttaattacaga
accatgagccgaggagagtactccattatctcccagcttaagaaggagttggacgaccac
tggatgaactatatctccttcgccgggctgcgcacgcacgtggagctggaaggccgcctg
atgacggagctcatctacgtgcacagcaagatgctcatcgccgacgacaacaccgtcatc
atcggctcggccaacatcaacgaccgcagcatgctgggcaagcgtgacagcgaggtggcc
gtcatcgtggaggacacggaaaaggtggcctccgtaatggacggacacgagtttgaggcc
ggcccgtacgcgctcggcttgcgtctggagtgctttcggacgatcctcggcggacacgac
gacgcaaccatcgatctctccgaccccatcagtgaccgcttctacaaggaggtgtggatg
accacggcgggccgcaacgccaccatttatgaaaaggtgttccgctgccttccctcctcg
ctggtgcgcaacatgtccgagctggagcagtaccagtccaagcccggtctggcccaaacc
gaccaggcccgcgctcaagaggagctgcgcaagatccgcggcttcctggtacagtttcct
ctggacttcctgtcggagcacaacctcatgccttcggtcgggacgaaggaagccatggtg
cccaccgagatatggacgtag
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integrated database retrieval system
