Syngnathus scovelli (Gulf pipefish): 125980968
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Entry
125980968 CDS
T08785
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125980968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125980968
Spliceosome [BR:
sscv03041
]
Complex A
U1 snRNP components
U1 related factors
125980968
Complex B
125980968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
125980968
NCBI-ProteinID:
XP_049596654
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MSFPPPLNRQPLSIPQLPPGLPPPQFGTFGPPVPPGTPMIPVHMGVVTPSPSVLVPTTVS
VAQKPMLPNKINFRAKDPEDGPTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRVQGAS
GKLQAFGFCEYKEPESTLRSLRLLHELMLGDKKLLVKVDAKTKAQLDEWKAKKKSANGAA
SGDGKNEEEDEVLDEETLRRDQAAKGAIEVLIREYSSELSNSADGNGQLRKKRKDKKDED
DINAMELEDDKRDLISREISKFRDTHKKLEEEKGKKEKERQELEKERREKDKERERERER
RDREKEKERERDKERERDRERERDRDRERERERERERERERERERERTREREREKSRDIS
EARSHSRERTRDDKKRDRDEDEEDVYERRRLERRLRDKEAAYQERLKNWELRERKKLRDY
SKEMEREEERSRETMKEAKRLKEFLEDYDDERDDHKYYRGSALQKRLRDREKETEMDERD
RKREKEELEEIRQRLLAEGHPDPDAEMQRLEEEAERRRKPPLKLEPEEKVKQEKKERESH
RESHRESHRDSHRESHRESHRESHRESHRESHRESHREPHREREKSASVKPAEPTPRDPP
PHSEEDEEEERRRRRRREEEEEERQRVEHHQQQQQQEEEQQQQQQEQEQQQQQEEQQQQH
HEAHNGGDSPEARLHLKALMRPINTAPSVSSASGNATPNTPGNDSPRGIIIPGERTPEVQ
PLEEHRPKIGLSLKLGSTNSPSQLHAIKRKKLAAADSIFNKFNEDEDADEQPRKRKLVPL
DYGDDDKSLGLDGADVSAAKSGVNSEEKRKNIRSLIEKIPTARPELFTYPLDWSMVDSTL
MDRRIKPWINKKIIEYIGEEEATLVDFVCSKVMAHSTPQGILDDVAMVLDEEAEVFIVKM
WRLLIFETEFKKIGQAK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccctcctccgcttaaccgccagccgctgagcatcccccagttgccccccggg
ctccccccgccccagttcggcaccttcggtccgcccgtcccaccaggtactcccatgata
ccagttcacatgggtgtcgtgaccccctctccctcagttcttgtcccaaccacagtttct
gttgcgcagaagccgatgcttccaaacaagatcaacttccgagccaaggacccagaggat
ggccccactactaccgtgtttgtgggcaacatctcagaaaaggcgtctgacatgctggtc
aggcagctgctggcgaaatgtggcattgttctaagctggaagcgagtccaaggcgcttct
gggaaactacaagcgtttggcttctgcgagtacaaggagcccgaatcgacgctgcgatcc
ctgcgactcctgcacgagctgatgctgggcgacaaaaagctgctggtcaaagtcgacgcc
aagaccaaggcgcagctggacgagtggaaggccaagaaaaagagcgccaatggcgcggca
agcggcgacggtaagaacgaggaagaggatgaggtgctggacgaagagaccctgcgtcga
gaccaggcggcgaagggcgccatcgaagtgctcatccgggagtattccagcgaactcagc
aactccgcggacggcaacgggcaacttcgcaagaagagaaaagacaagaaagacgaggat
gacatcaacgccatggagctggaggatgacaagagggacttgatttccagagagatcagc
aaattccgtgacacacacaagaaattggaggaggagaaagggaagaaggagaaggagcgg
caggagctggaaaaagagcggcgggagaaggacaaggagcgagagcgcgagagggagcgc
cgcgaccgggagaaagagaaggaacgggagcgggacaaggagcgcgagagggaccgggaa
cgcgagcgagaccgggacagggagcgcgaacgggagcgcgaacgggaacgcgagcgggaa
cgcgagcgcgaacgggagagaaccagggagcgcgagagggaaaaaagtcgagacatcagc
gaagctcgcagccattccagagagaggacaagagatgacaaaaaacgagaccgcgatgaa
gacgaggaagatgtgtacgagcgcaggagacttgagaggagactccgagataaggaagca
gcctatcaagagcggctgaaaaactgggaactgcgggagaggaagaaattgcgcgactac
agcaaggaaatggagcgggaggaggaacggagccgcgagactatgaaagaagccaaacga
ctcaaggaattcctcgaagactatgacgacgaacgcgacgatcacaaatattacagaggc
agcgctctgcaaaagcgccttcgcgaccgggaaaaggagaccgagatggacgagcgcgac
cgcaagagagagaaggaggagctggaggaaatccgacagaggctcctggccgagggtcac
cccgaccccgacgcagaaatgcaaaggttggaggaagaggcagagcgcagacggaagcct
cccctcaagctggaacccgaggagaaagtgaagcaagagaaaaaggaacgagaatcccac
cgggagtcccacagggagtcccaccgtgactcccatagagaatcccacagagaatcccac
agagagtctcatagagagtcccacagggagtcgcacagagagtcacacagagagccccac
cgggaaagggagaagagcgcgtcggtaaagcccgctgagccgacgcctcgagaccctccg
ccgcattcggaagaggatgaagaggaggaaaggcggcggcggcgaaggcgagaggaggag
gaagaggagcggcagcgggtggaacatcatcaacaacagcaacaacaagaagaagaacag
cagcagcagcaacaggagcaggagcagcagcagcaacaagaagagcagcagcagcagcat
catgaggcccacaatggtggggattcacctgaggctaggctgcacctcaaagccctcatg
cgaccaatcaacaccgctccctctgtgtcctctgccagcgggaatgccacgcccaacacg
cctggcaacgactccccgcgcggcatcatcattccaggcgagcgaacgcctgaggtgcag
cctctcgaggagcaccggcccaagattggcctcagtctcaagctgggttctaccaacagc
cccagccagctgcacgccatcaagcgcaaaaagctggcagcagcagacagcatcttcaac
aagttcaatgaggacgaagatgccgacgagcagccgcgcaagaggaagctagtgccgcta
gattacggagacgacgacaagagcttgggcctggacggcgccgacgtgtcggccgccaaa
agcggcgtcaattccgaagagaaacgcaagaacatccgcagcctcatcgagaagatcccc
acggcccggcccgagctcttcacatacccgctcgactggtccatggttgattcgactctg
atggaccgccgcataaaaccgtggatcaacaagaaaatcattgaatacatcggcgaggag
gaagcaacgctggttgattttgtctgctcaaaggtgatggcacacagcactcctcagggt
attctcgatgacgtcgccatggttctcgacgaggaagcggaagtgttcatagtcaaaatg
tggcggttgttaatatttgaaactgaattcaagaagatcggacaagcaaaataa
DBGET
integrated database retrieval system
