Syngnathus scovelli (Gulf pipefish): 125980984
Help
Entry
125980984 CDS
T08785
Symbol
rtf1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125980984 (rtf1)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
125980984 (rtf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
125980984
NCBI-ProteinID:
XP_049596709
LinkDB
All DBs
Position
14:complement(12485957..12490931)
Genome browser
AA seq
708 aa
AA seq
DB search
MPPLETNIRRIHRGSGGFSSLAWPTLHGVTMVNVKKRKGRVVIDSDSEDSASDDNLDQEL
LSLAKRKRVDSGEQEEPMSKPTASTDSETSDSDDEWTVGGTKVKKKVKQGKGHEKKNASK
KKLHKTTASGSSNGDSSGESSAPEEGEVSDSDSNSSSSSDSDSSEDDVFRDGYDDDLMGD
AEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKEEKKKKHEEEQEK
RKLSQVQDTQVVMSHNKERRSKRDEKLDKKSQAMEELKAEREKKKNKTAELLAKREPLKT
SEVYSDDEEEEEEEDDDKSSVKSDRSSRSSSFDDDDEKEETPPKSQPVSLPDELNRIRLS
RHKLERWCHMPFFAKTVTGCFVRIGIGNSSSKPVYRVAEITDVVETAKVYQLGTTRTNKG
LQLRHGGDMRVFRLEFVSNQEFTENEFMKWKEAMIMAGMQVPTLDEITKKEQTIKEAMNY
KFNDKDIEDIVKEKDRFRKAPPNYAMKKTQLLKDKAMAEESGDGDKVKVIQDELNELEER
AEALDRQRTKNISAISYINQRNRSWNIVESEKALVAEGQNARNQQMDPFTRRQCKPTMVS
NARDPSVHAAILAHLNQKYGSGSTPDPSPLEKNKQGLTDPKEKDVTKPTTDLSEDLFKVH
DFDVKIDLQVPNAEANSLSVSSNALPVKDGAPRRSLNLEDYKKRRGLI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgccccccctcgaaactaacataagacgaatccaccgcggtagtggtggttttagcagc
ttagcttggcccacattgcacggcgtaaccatggtgaacgttaagaagcggaaaggtcgt
gtcgttatcgactcggactctgaagacagcgccagcgatgacaacttagatcaggagctg
ctgtcattagcaaagaggaaacgggtggattccggcgagcaggaggagccgatgagcaaa
ccaacagcttctactgattccgagacgtcagacagcgatgacgagtggaccgtcgggggc
actaaagtcaaaaagaaggtaaaacaaggcaaaggtcatgagaaaaagaacgccagcaag
aagaagcttcataagacgacagcgtcgggaagctcaaatggagacagctcaggcgaaagc
tctgcgccagaggaaggcgaggtgtccgactcggacagcaacagctcctccagctccgac
tcggactcgtcagaggacgacgtcttccgggacggctacgacgacgacctgatgggagac
gctgaggacagagcgcggttggagcagatgacggagaaggagcgcgagcaggagctcttc
aacaggatcgagaagagagaggtgctcaagagacggtttgaaatcaagaagaagctgaag
acggcaaagaagaaagagaaagaggagaagaagaagaagcacgaagaagagcaggaaaaa
cgcaagctatctcaggttcaagacacacaagtggtgatgtcacacaacaaggaacggcga
tccaagcgcgacgagaaactcgacaaaaagtctcaggccatggaagagctgaaagccgag
cgagagaagaagaaaaacaaaacggcagaactcttggccaaacgcgagcccctgaagacc
agcgaggtgtactcagacgacgaagaggaggaagaagaggaagacgacgacaagtcatcc
gtcaagagcgacaggagttcacgctcgtcctccttcgacgacgacgacgaaaaagaagaa
acgccgcccaaatcgcaacccgtgtctctgcccgatgagctcaaccggatccgcctgtca
cgacacaagctggagcgttggtgccacatgcccttctttgccaaaaccgtcaccggctgc
ttcgtcaggatcggtatcgggaacagcagcagtaaaccagtctacagagtcgctgaaatt
acggacgtggtggagacggcaaaagtttaccaactgggcacgacgcggacaaacaaagga
ttgcaattacggcacggtggcgacatgcgcgtcttccgcctggagttcgtgtccaatcag
gagtttacagaaaacgagttcatgaaatggaaagaggcgatgattatggccggcatgcaa
gtgcccacactggacgagatcaccaaaaaggagcagaccatcaaagaagccatgaattac
aagttcaacgacaaagacatagaagatatcgttaaagagaaggacagattccgaaaagcg
ccacctaactacgccatgaagaaaactcagttgcttaaagataaggctatggcggaggaa
agcggcgacggcgacaaagtgaaggtcatccaggatgagttgaatgaactggaggagcga
gcagaggcgctggataggcagagaaccaagaacatctccgccatcagctacattaatcag
aggaacagaagctggaacatcgtggaatcggaaaaagctctggtggctgagggacaaaat
gccagaaaccagcaaatggacccgttcactcggagacagtgcaaacccaccatggtgtcc
aacgccagagacccgtcggtgcacgctgccattctggctcacctgaaccagaagtatggc
tccggatccacgccggacccttctcctcttgagaagaacaaacaggggctaacggaccca
aaggagaaagacgtaaccaagccaaccacagacctctccgaagatttattcaaagttcat
gattttgatgtaaagattgaccttcaagtccctaatgcagaagcaaattctctgtcggtg
agctccaacgcgctaccggtaaaagacggcgccccccgccgatcgctcaacctggaggac
tacaagaagaggagggggctcatctga
DBGET
integrated database retrieval system
