Syngnathus scovelli (Gulf pipefish): 125980989
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Entry
125980989 CDS
T08785
Symbol
fbxo30a
Name
(RefSeq) F-box only protein 30a
KO
K10307
F-box protein 30
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125980989 (fbxo30a)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125980989 (fbxo30a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
125980989
NCBI-ProteinID:
XP_049596715
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Position
14:complement(12505376..12510122)
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AA seq
703 aa
AA seq
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MEGLHPHCLKCINRRCMVRPEAGLSCDLIGCPLVCGAVFHACKLSEHRLLCPYERLPCLN
SGFGCPFAVARAKMAQHLETCPASIVCCTMEWNRWPVSYADRKSYENLSRDFDEVEQLDM
ALALQDQRMLLESLKVTTTVSKDGKGDNDKMATPPCGEATNGAVEMEEEPYSDLYRASVE
TSRSLAAALDILTHSKGVVGLNGENGAAGKNVDMRESDSDSECELGAVGGAVENNGAIAW
PEEDEDFVELFFEDKEDAIEDPAEEEALEPVWPEAPRDYVPAVLPHPQAEPLAAPIPFLL
SDQVRNNFLHQLPTELRYRCLERKLHNVEVLRGISMFTFNGRRALFSDPYLFRAKMEDKA
VDTSDLEVADDPMGLHGIDLITAALLFCLGDSPGGRGISDSRFVDGYHINFGTQTFSFPS
AILATNTMVGDIASASACDHANPQLSNPSPFHTLRLDLVLECVARYQTKQRSMFTFVCGQ
LFRRDEFSSHFKNVHGDIHAGLNGWMEQRCPLAYYGCTYSQRRFCPSVQGFRIIHDRHLG
SFGVQPGLPAKNSDKPPRGLRPRFSSKCDQLSGLPFEVLQHMASFLDSFSLCQLSRTSRT
MRDVCASLLQMRGMVVLLWKKKRKEDGSFSWQITDKVWRFSTAFGTVNEWKFANISSMAD
HLKKCKFNTVSRREEAIPLPCMCFTRELTKEGRCLRSVLKPVA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcttcacccgcactgccttaaatgcatcaaccggagatgcatggtgcggccg
gaggcgggcctgtcttgtgacctcatcggctgcccgctggtgtgcggcgccgtcttccac
gcgtgcaagctctccgagcaccgcctgctgtgtccgtatgagcgcctgccgtgcctcaat
agcggtttcggttgcccctttgccgtggcccgggccaagatggctcagcacttggagacc
tgccctgctagcatcgtgtgctgcaccatggagtggaaccgctggcccgtcagctacgca
gaccgcaagtcctacgagaacctgagccgggactttgatgaggtggagcagctggacatg
gcactggcccttcaggaccagcgcatgctcctggagtccctcaaggtcacaaccactgtg
tccaaggatggcaagggggacaacgacaagatggccacgcctccctgcggcgaggctacc
aacggggcggtggagatggaggaagagccgtacagcgacttgtaccgagcttcggtggag
accagccgtagcttggcggccgccttggacatcctcacgcactccaagggcgtcgtcggt
ctgaacggggaaaatggcgccgcagggaagaacgtggacatgcgcgagagcgactcggac
tctgagtgcgagctgggggcggtgggcggcgccgttgagaacaacggcgctatcgcttgg
ccggaggaggacgaggatttcgtggagttgttcttcgaggacaaggaggatgccatcgaa
gacccggccgaggaggaggcgctggagcctgtgtggcctgaggcgccaagggactatgtg
cccgccgtcttgccgcacccccaggcggaaccgctggccgcgcctatccccttcctcctc
tcagaccaggtgaggaacaactttttgcaccagctacccaccgagctcaggtatcggtgc
ctggagcgcaaactccacaacgtggaggttctgcgaggcatcagcatgtttactttcaac
ggccgccgcgcgctgttctcggacccttacctcttccgcgccaagatggaagacaaggcg
gtggacacgtcggacctggaggtggccgacgaccccatgggtcttcacgggatcgacctg
atcacagccgccttgctcttctgcttgggcgactcgccaggcgggcgcggcatctccgac
agccgcttcgtggacggctaccacatcaacttcggcacgcagaccttctccttcccctcc
gccatcctggccaccaacaccatggtgggcgacatcgcgtcggcgtctgcgtgtgaccac
gccaatccgcagctgtccaaccccagccccttccacacgctgcgcctggacctggtgctg
gaatgcgtggcacgctaccaaacgaagcagcgctccatgttcacctttgtgtgcggccag
ctgttccgccgcgacgagttctcctcgcacttcaagaacgtgcacggcgacatccacgcc
gggctcaacggctggatggagcaacgctgccccctagcatactacggctgcacctactcg
cagagacgcttctgcccgtcggtgcagggtttccgcatcatccacgaccgccacctgggc
tccttcggcgtgcagccgggcctccccgccaaaaactcggacaagccgccgagaggcctc
cgcccgcgcttcagctccaaatgcgaccagctcagcggtctacccttcgaggtgctgcag
cacatggccagcttcctggacagcttcagcctgtgtcagctgtcccggacgtcacgcacc
atgagggacgtgtgcgccagcctcctccagatgcgcggcatggtcgtcctgctgtggaag
aagaagcggaaggaggacggctcgttctcgtggcagatcacagacaaggtgtggcgcttc
agcaccgccttcggcacggtgaacgagtggaagttcgccaacatcagcagcatggcggac
cacctgaagaagtgcaagttcaacacggtgtcgcggcgcgaggaagccatcccgctgccc
tgcatgtgtttcacccgcgagctaaccaaggagggccgctgtttacgctccgtgcttaag
cccgtggcctaa
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