Syngnathus scovelli (Gulf pipefish): 125980994
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Entry
125980994 CDS
T08785
Symbol
pls1
Name
(RefSeq) plastin-1
KO
K17275
plastin-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125980994 (pls1)
04147 Exosome [BR:
sscv04147
]
125980994 (pls1)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
125980994 (pls1)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of microglial cells
125980994 (pls1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
125980994
NCBI-ProteinID:
XP_049596728
LinkDB
All DBs
Position
14:13291425..13296408
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AA seq
632 aa
AA seq
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MHKKMTHISREDLEDLREAFNKVDIDNSGYVSNFELQELFREASFSLAGYQVREILETFA
AGDTNKDEKISFEEFVAIYQELKSKKLSETFRKSITRRDGIQSFGGMSGISSVGTQHSYS
DEEKVAFVNWINKALAKDPDCSHLLPMNPNDNSLFTSVRDGILLCKMINQSQPETIDERV
INTRKLTTFTMTENLVLALNSASAIGCTVVNIDALDLMVGKPHLVLGLFWQIIKVGLFAD
IEISRNEGMISLLSEGESLDHLMSLSPEELLLRWVNYHLSNAGTQSIKNFSADIKDSRAY
FHLLDQIAPRGEHDFMSVKIDMSGLNERDPDQRAELMLQQASRLDCRQFVTARDVTAGNS
KLNMAFVANLFNTHPALQSGHVNGLEADRPEPESREEKTFRNWMNSLGVHPYVNHMYHDL
YDGLVILQLYEKVNVPVNWKKVNQPPYPALGANMKKLENCNYAVSLGRNVAHFSLVGIGG
ENLNEGSPMHILALVWQLMRRYTLLVLSDLGDGEKVGEQIILNWVNTTLSQKQKDSQISS
FKDLHISTSLPVIDLIDVIAPGTVKWDMVKKPERGVMKTADKLNNAKYAVSLARKIGARI
YTLPDDLVEVNPKMVLTLFACLMGHGLKKAHR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaaagatgacccacatttccagggaggacctggaggacctccgagaggcgttc
aataaagtcgacatcgataacagcggctacgtgagcaactttgagctccaggagctgttc
cgcgaggccagcttctctttggccggatatcaagtgcgtgaaattttggagacctttgcg
gccggcgacaccaacaaagatgagaagatcagctttgaggagtttgtcgctatctatcag
gagctgaagagcaagaagctcagtgagaccttccgcaaatccatcaccaggagggatggt
atccagtcctttggggggatgtcgggaatctcaagcgtggggacacaacactcctactca
gatgaggagaaggtggcgtttgtcaactggatcaacaaagccttggccaaagatcccgac
tgcagccacctcctccccatgaaccccaacgataacagcctcttcacctcggtccgcgac
ggcatcctgctgtgcaaaatgattaaccagtcccagcccgaaacgatcgacgagcgagtc
atcaacacacggaagctgactactttcacaatgaccgaaaatcttgtcctggcgctaaac
tcagcctcggccatcggctgcacggtggtgaacatcgatgcgcttgatctgatggttggg
aaacctcatttggtgctgggattattctggcagattatcaaagtgggcctctttgctgat
atcgaaataagccgcaacgaaggcatgatttccctcctgagtgagggagagagtctggac
cacctgatgtctctctctcctgaagaattgcttctccgctgggttaactaccatttgtcc
aacgccggcacccaaagcattaagaacttcagcgcggacatcaaggactctcgagcttac
ttccacctcctggaccagattgctccccgtggagagcacgatttcatgagtgtcaaaatt
gacatgagcggcctgaacgagcgggacccggaccagcgggccgagctgatgctgcagcag
gcgtcccgtctggactgccggcagtttgtgacggcgcgtgacgtcaccgccggcaacagc
aagctcaacatggccttcgtggccaacctgttcaacacgcacccggccctgcagagcggc
cacgtcaacggcttggaggccgaccggccggaacccgagagcagagaggagaagaccttc
cggaactggatgaactcgcttggcgtgcatccttatgtcaaccacatgtaccacgatctg
tacgacggtttggtgatcctgcagctttacgagaaggtgaacgtgcctgtcaactggaag
aaagtcaaccagcctccgtaccccgccctgggcgccaatatgaaaaagctggagaactgc
aactacgccgtgagcctgggcaggaacgtggcacacttctccctcgtgggcatcggcggt
gagaacctgaacgaggggagccccatgcacatcttggcgctggtttggcagctcatgagg
aggtacacattgctggtgctgtcagacctgggcgatggcgagaaggtgggagagcagatc
attctcaactgggtcaacaccaccctcagccaaaagcaaaaagattcacagatcagcagc
ttcaaggatctccacatcagcaccagccttccagtgatcgacctgatcgacgtcatcgct
cccggcaccgtcaagtgggacatggtgaagaaaccagagaggggcgtgatgaaaaccgct
gacaaactcaacaacgccaaatacgcagtatcactggctcgaaagattggcgctcgcatc
tacactctgcctgacgacttggtggaggtgaatcccaagatggtgctgacgctatttgcc
tgcctcatggggcatggtttgaaaaaggcccatcgctaa
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