Syngnathus scovelli (Gulf pipefish): 125981025
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Entry
125981025 CDS
T08785
Symbol
psen1
Name
(RefSeq) presenilin-1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04310
Wnt signaling pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125981025 (psen1)
04330 Notch signaling pathway
125981025 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125981025 (psen1)
Peptidases and inhibitors [BR:
sscv01002
]
Aspartic peptidases
Family A22: presenilin family
125981025 (psen1)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
125981025
NCBI-ProteinID:
XP_049596793
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All DBs
Position
14:12594862..12600272
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AA seq
463 aa
AA seq
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MANETQDVENNVDQQEANGSTEQHQGDGSTRDGGGSRGPEQNGLPPAARPPRVAEADEED
DEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTQNDGQRLIYTPFPEDTDTVGER
ALNSILNATIMITVIIVMTLVLVLLYKYRCYRVIQGWLFISSLLLLFFFSYIYLKEVFKT
YNVAMDYITLVVIVWNFGVVGMMCIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTAWL
ILAVISVYDLLAVLCPKGPLRILVETAQERNEPIFPALIYSSTMVWLVNMADTDTVPKRI
PADTTSPQPEPQEAAASPVSSSSPTGDNGGFTTSWMSQQEHQLGHLQSTDDSRREIQQMP
SDRPPVEDDDEERGVKLGLGDFIFYSMLVGKASAAASGDWNTTLACFVAILIGLCLTLLL
LAIFKKALPALPISIFFGLVFYFATDNLVRPFMDELALHQFYI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgagacgcaagacgtagaaaacaatgtggaccaacaggaggccaacggtagc
accgagcaacaccaaggagacggctccaccagagatggcggaggatccagaggtccggag
cagaacggccttccccccgccgccaggccccctcgcgtggcggaagccgacgaggaggat
gacgaagagttaacgctcaaatacggcgccaagcacgtcatcatgctcttcgtccccgtg
acgctgtgtatggtcgtcgtggtggccaccatcaagtcggtcagcttctacacgcagaat
gacggacagaggctgatctacacgccgttcccggaggatacggacacggtgggcgagcga
gcactgaactccatcctcaacgccaccatcatgatcaccgtcatcatcgtcatgacgctg
gtgcttgtgctgctctacaagtaccgctgctaccgggtgattcaaggctggctcttcatc
tcctccttgctcctgcttttcttcttctcctacatctacctcaaggaggtgttcaagacc
tacaacgtggccatggactacatcacgttggtagtcatcgtgtggaactttggcgtggtg
ggcatgatgtgcatccactggaagggcccgctgcggctccagcaggcctacctcatcatg
atcagtgctctgatggcgttggtcttcatcaagtacctgcccgaatggaccgcctggctc
atactcgctgtcatctccgtctacgatctgttggcggtgctgtgtcccaaaggccctctg
aggatcttggtggagacggctcaggaaaggaacgagcccattttccctgctctcatctac
tcatcgaccatggtatggctggttaacatggctgacacagacacggtgcctaagaggatc
cccgccgacaccacgtcgcctcagcccgagcctcaagaagcggcggcgtccccggtgtcg
tcatccagtccgacaggggacaacggaggcttcacgacgtcctggatgagccaacaagag
caccagctgggacacttgcagtccacggatgactctcggcgggagatccagcagatgccc
tcggaccggccacccgtcgaggatgacgacgaggagcggggtgtcaagctgggcctggga
gacttcatcttctacagcatgctggtgggaaaagcctcggccgccgccagcggcgactgg
aacaccacgttggcctgcttcgtggccatcctcattggcttgtgtctgacgctgctgctg
ctggccatcttcaaaaaggcgctcccggcactgcctatctccatcttcttcgggctggtc
ttctactttgccaccgacaacctggtgcgccccttcatggatgagctggcgctgcaccaa
ttctacatatag
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