Syngnathus scovelli (Gulf pipefish): 125981065
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Entry
125981065 CDS
T08785
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125981065 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125981065 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125981065 (tra2b)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125981065 (tra2b)
Spliceosome [BR:
sscv03041
]
Common components
Common spliceosomal components
SR proteins
125981065 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125981065
NCBI-ProteinID:
XP_049596865
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All DBs
Position
14:12365838..12369400
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AA seq
323 aa
AA seq
DB search
MSDTEKEFRDKEPQPGSGSSSPQRSAKSASRSPARSKDGSQHSRSRSRSRSRSKSKSRSR
SHRSSRRNYSRSRSRSRRRRSRSRSGSRRRSHSRSPMSNRRRHIGNRVTITLPKMAANQL
FILLIGKKKILLCLLPNSFCLPKANPDPNTCLGVFGLSLYTTERDLREVFSKYGPLADVN
IVYDQQSRRSRGFAFVYFENYEDSKEAKEHANGMELDGRRIRVDFSITKRAHTPTPGIYM
GRPTYGGGGGGGGGGGGGGGGSRRMSRDYDRGYDRGYDRGYDRDYDRYDDREYRSYRRRS
PSPYYSRGYRSRSRSRSYSPRHY
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccgagaaagagttcagggataaggagccacagcctggctcggggagttcc
tcccctcagcgatcggcaaaatctgccagccgctcgccggcacgctccaaggatggttcc
cagcattccaggtccaggtctcgctcacgctccagatccaaatccaaatctaggtcccgt
tcccaccggagctcacgtaggaactattcccgctctcgttcccgctctcgccgtcgccga
tcccgaagccgctctggcagccggcgaaggagccacagccgctcgcccatgtccaaccgc
cgcaggcacattggcaatagggtaactattacattgcccaaaatggctgcaaaccagctg
tttattttattaataggcaaaaaaaagatcttgttgtgcttattgccaaactccttctgc
ctcccaaaggccaaccctgacccaaacacgtgcctgggtgtgtttggcctgagcctgtac
accactgagcgggacctgcgggaagtgttctcaaagtatggccccctggcggacgtcaac
atagtgtacgaccagcagtcgcggcgctccaggggcttcgctttcgtctactttgagaac
tacgaggactccaaggaggccaaggagcacgctaacggaatggaactggacggccgacga
atccgcgtggatttctccattaccaaacgagcgcacacccccactcctggcatctacatg
ggacggcccacatacggtggaggcggcggcggtggtggcggcggcggcggagggggaggc
ggctcaaggcgcatgtcaagggactacgaccgaggctacgatcgaggttatgatcgtggt
tacgatcgggactacgatcgctatgacgaccgggagtaccgatcgtacagacgaagatct
ccatcgccgtactacagcagaggataccgctctcgatccagatcacgatcctactcccca
cgtcactactga
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