Syngnathus scovelli (Gulf pipefish): 125981096
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Entry
125981096 CDS
T08785
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125981096 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125981096 (vti1b)
Membrane trafficking [BR:
sscv04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
125981096 (vti1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
VHL_C
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
125981096
NCBI-ProteinID:
XP_049596907
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Position
14:complement(12683751..12686012)
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AA seq
221 aa
AA seq
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MSSEEFEKLHEIYRSLYEELKLMPERLLRSHGEEKKSLLRAFDERNLEAEEILQGMEEEL
RDAPPSYRNPMRTKLRLYQRDLAKLQRDAKNSAPLLSDGSHGSIYSSQNQQSTRVQSQRA
LLLQGTESLNNASQSIERSQRLAIETENIGTEIIEELGGQREQLDRTKDRLVNTGENLSR
TRKILRSMSRRLMTNKLLLAVIILMELAILGAVVYLKFFRR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggaagaatttgagaagttgcacgaaatctataggtccctgtacgaggagcta
aagctaatgccagagaggttgctgaggagtcatggagaggagaaaaagagcttattgagg
gcctttgacgaaagaaatttggaggcggaggaaattctgcaggggatggaagaggagctg
cgtgatgctccaccatcctaccggaatcccatgagaaccaagctgcgtctttaccaacga
gacctcgccaagctgcagcgggacgccaagaactcggccccgctgctgtcggacgggagt
catggcagcatctattcatcgcaaaaccaacaaagcacacgagtgcagtcgcagcgagcc
ctgctcctgcaaggcaccgagtcgctgaacaacgcaagccagagcatcgagcgcagtcag
cgcctggccatcgagactgagaacatcggcaccgaaatcatcgaggaactcggcgggcag
cgggagcagctggatcggaccaaggacagactggtaaatacgggggagaacctcagtcgc
actcggaaaatccttcgttccatgtcacgacggctcatgacaaacaagctgcttctcgcc
gtcatcattctcatggaactggccattctaggcgctgtggtttacctcaagttctttcgc
cgatga
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