Syngnathus scovelli (Gulf pipefish): 125981134
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Entry
125981134 CDS
T08785
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125981134 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125981134 (capn3a)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
125981134 (capn3a)
Peptidases and inhibitors [BR:
sscv01002
]
Cysteine peptidases
Family C2: calpain family
125981134 (capn3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
125981134
NCBI-ProteinID:
XP_049596958
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All DBs
Position
14:complement(12526376..12533396)
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AA seq
713 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGTLNKPLRLNGQDFGAMRQECVQRGTLFDDDSFPASV
ESLGFKELGHKSNKVKNIVWKRPKEISENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPSDQSFTQEYAGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYELKEAPKELYKIMKKALERG
SLMGCSIDSLVPARYETRTATGLVKGHAYSVTGVEECRPSQHRETKVRLVRLRNPWGQVE
WNGPWSDNSKEWNALPKAEKDKLQHQSAEDGEFWMSFEDFKRNYTKLEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYLDTFWTNPQYRLRLLEEDDDPEDNEVGCTFVVAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMPKDFFLGSSSKARCKSYINLREVT
QRFRLSPGEYVIVPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPASVGEET
EEEDQQFRTIFQEIAGDDMEITANELRKVLNRVIKHKNLSTEGFSLESCRSMIALMDMDG
TSRLNLQEFRHLWNKIKQWQGIFKQYNPDQSGSIDSYEMRNAVNDAGFRLNNQLYDIITM
RYANESMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEWLQLTMYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacaccgtctggctttttctgcgaccggctcatccgggagcgagagcggcgc
gacggagaaggtaccctcaacaagccgctacgcctcaacggccaggactttggcgccatg
cggcaggagtgcgttcagcgtgggactctctttgatgacgactctttcccggccagcgtt
gagtcgctgggattcaaagagcttggacacaagtccaacaaggtcaagaacattgtttgg
aagaggcccaaggaaattagtgagaacccacagttcatcgtgggcggggccagtcgtacg
gacatctgccagggagatctcggtgactgttggttgctagccgccatcgcctgcctcact
ctcaacgaaaagctcctctatcgggtggttccttcggaccagagtttcacgcaggaatat
gccgggatcttccacttccagttctggcgctatggcgactgggtggacgtggtcattgat
gaccgcatccccaccttcaacaaccagctggtgttcaccaagtcagcggagagaaacgag
ttctggagtgccctcctggaaaaggcctacgcaaaactacacggctcctatgaagcccta
aagggtggcaacactactgaggccatggaggacttcaccggcggggtgacagagttctac
gagttgaaggaggctcctaaagagctctacaagatcatgaagaaggctcttgagcgaggc
tccctcatgggctgctccattgattccctcgtccctgctcgctatgagacccggaccgcc
acgggcctggtgaagggccacgcgtattccgtgacgggggtggaggagtgtcggccctcg
cagcacagagagaccaaagtgcgcctagtgcgtctcaggaacccttggggccaggtggag
tggaacggaccatggagcgataactcaaaggagtggaacgcgttacccaaggccgagaag
gacaagctacaacaccagagcgcggaagacggagagttctggatgtcctttgaggatttc
aaaaggaactacacaaagctcgagatctgcaacctgacccccgatgccctggaggacgac
aagatccacaagtggaccgtttctgtgaacgagggccgttgggtgcgaggttgctcggcc
ggaggctgcagaaactaccttgacactttctggacgaatcctcagtaccgccttcgctta
ttggaggaggacgacgaccctgaggacaacgaggttggctgcaccttcgtggtggctctg
atgcagaagaacaggcggaaagagcgcaagatgggcgccaacctgttcaccattggcttt
gccatctacgaggtgccaaaggagatgcacggcaacaagcagcacatgccaaaggacttt
tttctgggcagttcgtcaaaggctcgctgcaagtcgtacatcaacctgcgcgaggtcacc
cagcgcttccggctgagccccggagagtacgttatcgtcccgtccacgtacgagccccat
caagagggcgaattcatcttgcgcgtcttctccgaaaagaggaatacgtcagaggagata
gagaacaggattgaggcagaccatcccgtgccagcaccagcctcagtgggggaggagact
gaggaggaggaccagcagttccggactatttttcaggagattgctggcgatgacatggag
atcactgccaacgagctgagaaaggttctcaacagagtcatcaaacacaagaacttgagt
acagagggcttcagcctggagagctgcaggagcatgatagctctgatggacatggacggg
acgagtcgccttaaccttcaagagttccgtcacctgtggaataaaatcaaacaatggcag
ggaatctttaagcaatacaaccccgaccagtcgggcagcattgacagctacgagatgagg
aacgcagtcaatgacgcaggcttccgcctcaacaaccaactgtacgacatcatcaccatg
cgttatgccaacgagagcatgaacattgatttcgacagtttcatcagctgcctggtccgc
ctcgaggccatgttccgggcgtttcaggccttcgaccaagacggagatggcacgatccga
ctcagcgtattggaatggctccagttgaccatgtatgcctaa
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