Syngnathus scovelli (Gulf pipefish): 125981170
Help
Entry
125981170 CDS
T08785
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125981170 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125981170 (dkc1)
03032 DNA replication proteins [BR:
sscv03032
]
125981170 (dkc1)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
125981170 (dkc1)
Prokaryotic type
125981170 (dkc1)
DNA replication proteins [BR:
sscv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
125981170 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
Pus10_C
UPF0113
Motif
Other DBs
NCBI-GeneID:
125981170
NCBI-ProteinID:
XP_049596997
LinkDB
All DBs
Position
14:complement(5256285..5266303)
Genome browser
AA seq
540 aa
AA seq
DB search
MAGMGPDLCCCSAVRPKVAAEVLREEATRTTTTRKRKKQRPEAPDQSVTKMADTDVKKKK
KPKKTAEDVGEIQQQGDFLIQPESKVPTLDTSQWPLLLKNFDKLNVRTAHYTPLPNGSNP
LKRNIQDYIKSGFINLDKPANPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCVDR
ATRLVKSQQSAGKEYVGIVRLHNAIESEHTLARALETLTGALFQRPPLIAAVKRQLRVRT
IYESKLVEYDADRRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGVMGERD
NLVTMHDILDAQWQFDHNKDEAYLRRVIFPLEKLLVSHKRLVMKDSAVNAICYGAKIMLP
GVLRYEDGIEVNQDIVVITTKGEAICTAVALMTTAVISTCDHGVVAKIKRVIMERDTYPR
KWGLGPKASQKKMMIQKGLLDKHGKPNGSTPDAWKTDYVDYGVTAKESDVSSKRKREGTD
SEAEAAPVNEETPKEKKKREKRATMEATAAHNETVDIEPKIELESGKKKKKKKVREEASE
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccggaatgggaccagacttgtgctgctgtagtgcagtacgtccaaaggtggcagca
gaggttctccgtgaagaagctactcgcacgacaacgacgaggaagcggaagaagcagcgg
cctgaagcgcctgaccagtcagtcaccaagatggcggacacggatgtaaagaagaagaag
aagcccaagaaaacggccgaagatgttggggaaatccagcagcaaggggacttcctcatc
cagccggaaagcaaagtgcccacactggacacgtcgcagtggccccttctcctcaagaac
tttgacaagctgaatgtgcgcacagcccactacacaccacttcccaatgggagcaacccc
ctcaagaggaacatccaggactacatcaagtcgggcttcattaacctggacaagccggcc
aacccttcgtctcacgaggtggtggcatggatccggcggatcctgcgcgtggaaaagacg
ggccacagcggcaccctcgaccccaaagtcaccggctgcctcattgtgtgcgtagaccga
gccacgcgtttggtcaaatcccagcagagtgccggcaaagagtatgtggggattgttcgg
ctgcacaatgccatcgaaagtgagcacacgctggccagagccttagagacgctgacgggg
gcgcttttccagcggccgccgctcattgccgctgtcaaacgccagctgcgagtgcggacc
atctatgagagtaaactggtggagtacgacgccgataggaggctcggaatcttctgggtg
agctgtgaagcaggcacgtacatcaggacgctgtgtgtccacctgggcctgctgctggga
gtcggcggccagatgcaagagctccgcagggtccgctccggagtcatgggagagagggac
aacctggtgaccatgcacgatatcctggacgcccagtggcagtttgaccacaataaagac
gaagcgtacctgcggcgcgtcatcttccctctggagaaacttctggtgtcgcacaaacgc
ttggtgatgaaggacagcgcggtcaacgccatctgctacggtgccaagatcatgttgccg
ggtgtgctgcgctacgaggatggcattgaggtcaaccaggacatcgtggtcatcaccacc
aagggagaggctatctgcacggctgtggccctgatgacgacggcggtcatttccacctgc
gaccacggcgtggtggccaaaatcaagcgagtcatcatggaacgagacacttacccgcgc
aagtggggactcggccccaaggcgagtcagaagaagatgatgatccagaaaggtcttctg
gacaagcacggaaagcccaacggaagcacgcccgacgcctggaagacggactacgtggac
tacggcgtcaccgccaaggagtcggacgtgtcaagcaagaggaagagggagggaactgac
agcgaagcggaagccgcgccagtcaatgaggagacgcccaaagagaagaagaaaagagag
aagcgtgccacaatggaggccactgcagcgcataacgaaacggtggatattgagcccaaa
attgagcttgaaagtggcaagaaaaagaaaaagaagaaagtcagagaggaagcttctgag
tga
DBGET
integrated database retrieval system
