Syngnathus scovelli (Gulf pipefish): 125981184
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Entry
125981184 CDS
T08785
Symbol
gabra2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125981184 (gabra2a)
04082 Neuroactive ligand signaling
125981184 (gabra2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125981184 (gabra2a)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
GABA-A
125981184 (gabra2a)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125981184
NCBI-ProteinID:
XP_049597021
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Position
14:15396968..15400729
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AA seq
444 aa
AA seq
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MRGPWRSYLMSVLVYASALHARSKGDSDATRKDIATFTKILDSLLDGYDNRLRPGLGDRV
TEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWKDERLKFHGPMNILPLNNLMASKIWTPD
TFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSHSCPLKFG
SYAYTKSEVTYIWTRNASQSVDVAADGSRLNQYDLVGQTVGKETVQSSTGEYTVMTAHFH
LKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLP
KVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKTLVDDKKKESGAMKKNNA
VANYAPNISQDSTLATVSKCSSVSHPDKVSSEKKGVHKKTFNSVSKIDRISRIMFPVLFG
TFNLVYWATYLNREPVINDGDHSK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaccgtggcgctcgtacctcatgagcgtcttggtgtacgctagcgcattgcac
gcgcggtccaaaggtgattcggacgcgacgcgcaaagacatcgcaacgttcaccaagatc
ctggacagtcttctggatggctatgacaacaggctgagacctggcttgggtgaccgagtc
acagaagtcaagactgatatctacgtgaccagctttggcccggtgtcagacacagacatg
gagtacacagtggatgttttcttccgtcagagttggaaagatgaacgattaaagtttcac
gggccgatgaacatccttcccctcaacaacttgatggccagtaagatctggactcccgat
accttctttcacaacggcaagaagtcggtggcccataacatgacgatgcccaacaaactg
ctgaggattatggaggatggaacgctgctctataccatgaggctgacggttcaagccgag
tgccccatgcacctggaagactttcccatggactctcactcgtgtcctctgaagtttggc
agctatgcctacacaaagtctgaggtgacttacatttggactcgaaatgcttcccagtca
gtggacgtggcagctgacggatcaagactcaaccagtatgacttagtgggacaaacggtg
ggaaaggagaccgttcaatccagcactggtgaatacacggtcatgacggcacacttccac
ctgaagaggaaaattggctattttgtgatccagacctatttgccctgtatcatgaccgtc
atcctctcccaggtctctttttggcttaatcgagagtccgttccggccagaaccgtattt
ggtgtaaccacggtgctgacaatgaccaccttaagtatcagcgcccgcaattcactgccc
aaagtggcctacgccacagccatggattggttcatcgccgtgtgctatgcctttgtcttc
tctgcgctcattgaatttgccaccgtcaactacttcaccaagcgaggctgggcctgggac
ggaaagactctggtcgatgacaagaaaaaagaatcgggtgcgatgaagaagaacaatgcc
gtggcgaactacgctcctaatataagtcaagactcaacgctggcgaccgtctccaagtgc
tcctccgtcagccatcccgacaaggtctcctcggagaagaaaggcgtacacaagaaaacg
ttcaacagtgtcagcaagattgaccgcatttcccgtatcatgttccctgtgctctttggt
acctttaaccttgtttactgggccacctacctcaacagagaacctgttattaacgacggg
gatcattccaaataa
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