Syngnathus scovelli (Gulf pipefish): 125981198
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Entry
125981198 CDS
T08785
Symbol
gabrg1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125981198 (gabrg1)
04082 Neuroactive ligand signaling
125981198 (gabrg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125981198 (gabrg1)
Ion channels [BR:
sscv04040
]
Ligand-gated channels
GABA-A
125981198 (gabrg1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
125981198
NCBI-ProteinID:
XP_049597044
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Position
14:15401443..15405911
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AA seq
488 aa
AA seq
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MRLLLVRAVHAMSLCVLFAVLGSCVALQPGKQEEEDYEDVAINKTWVLSPKVYESDVTMI
LNKLLQGYDNKLRPDIGGKPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDGRLKFN
SSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWRNGRVMYTLRLTINAE
CYLKLHNFPMDEHSCPLEFSSYGYPRTEILYRWQRRAVEVADQRYWRLYQFAFVGMRNTS
DVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGI
TTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYFTSNRQTKKSK
AKNNAHVSGEEKEKDNEIRRTVLFVQLLSSPKKQQKPPSLVNIRPGASLLQMNNIMHYHD
DQDDFAYECLDGKDCATFFCCFDDCRSGAWRENRMHVRVSKIDSYSRIFFPTAFGLFNLV
YWIGYLYL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttgttggtcagggctgtgcacgcaatgagcctgtgcgtgctctttgctgtg
ctcggatcgtgcgtggcccttcagcctggcaaacaagaggaggaggattatgaggacgta
gccatcaataagacctgggtcctatcgccaaaggtctatgaaagcgatgtgaccatgata
cttaataaacttctgcaaggctacgacaacaaactacgacctgacattgggggcaagccg
acggtgatcgagacagccgtatacgtcaacagcattggaccggtcgaccccatcaacatg
gaatacaccatcgacatcttttttgctcagacgtggtatgacggcagactcaagttcaac
agttcaatgaagctccttatgctcaacagtaacatggtaggcaaaatctggattcccgac
acattcttcagaaattccaggaaatccgacgcccactggatcaccacgccaaaccgcctg
ctcaggctgtggcgcaatggcagagtgatgtacacgctcaggttgactattaatgcggag
tgttaccttaagctgcataactttccaatggatgagcactcgtgtccgctggagttttca
agctacggttacccccggacggagattttataccggtggcaaagacgagcggtggaggtg
gctgaccagcgatactggagactttaccagtttgcatttgtcggaatgagaaatacttct
gatgtggcgcacacccagtcgggggaatatgtcatcatgaccatcttttttgacctgagt
cggagaatgggttacttcaccatccagacgtacattccgtgtagcatgatagtggtcctg
tcctgggtctctttctggattaacaaggatgctgtcccagctcgtacatctttaggaatc
accacggtgcttaccatgaccaccctgagcaccatctccagaaagtccttgcccaaggtg
tcatacgtgacagccatggacctgtttgtctccgtctgcttcatcttcacctttgccgct
ctgatggaatatggaacgctgcattacttcaccagcaacagacagaccaaaaagtccaaa
gccaaaaacaacgcacacgtaagtggggaagaaaaagaaaaagacaatgaaatcagaaga
acggttctattcgtgcaacttttgtcgtctcccaaaaaacagcagaagccacccagtctg
gtcaatatccgtcccggagcgtccttgctgcaaatgaacaacatcatgcactatcacgac
gaccaggacgactttgcctatgaatgtctggacggaaaagactgcgcgaccttcttctgc
tgctttgatgactgtcgctcaggtgcctggcgagaaaacaggatgcacgtgcgagtgagt
aagatcgattcttactcacgaatcttcttcccgacagcttttggcctttttaatttggtt
tattggataggctatctttatctataa
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