Syngnathus scovelli (Gulf pipefish): 125981212
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Entry
125981212 CDS
T08785
Symbol
zfp36l1a
Name
(RefSeq) mRNA decay activator protein ZFP36L1a
KO
K18753
butyrate response factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
125981212 (zfp36l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125981212 (zfp36l1a)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125981212 (zfp36l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
DUF5473
zf-CCCH_UNK-like_4th
Motif
Other DBs
NCBI-GeneID:
125981212
NCBI-ProteinID:
XP_049597081
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Position
14:6743467..6748203
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AA seq
366 aa
AA seq
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MTTAVVSPFFDFEAINKNNKLLSYNGNLAAPHGHVSGALLDRKAVGSPGVYQRRHSVSSG
SAKFNQNQFLNSLKVAEHSPLITGLSGGNKENHLRLRDRSFSETGERLLHKCLGPASPTG
SQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLSRHPKYKTELCRTFHTIGFC
PYGPRCHFIHNADERRGPPLKSSNGSSPSTCSSSSSSSGEMERPRLQHSYSFAGFPSSAG
LRDSPTSVTPPPIFFPDDVPDWPSSNPFTYSSQELANLFGPSLGGVPLPPEASNGAPPSP
TSGPYYFRPMLESPQMFESPSSPQDSLSDQEGYQSSSGSSLSGSESPTLDTTRRLPIFSR
LSISDD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagccgtggtgtcgcctttcttcgacttcgaagcaatcaataagaacaataaa
ctgctgagctacaacggcaacctggcggccccacatggccacgtctccggcgccctgctg
gacaggaaggcggtgggctcgccgggggtgtaccagcgacgacactctgtcagcagcggc
agcgcaaagtttaaccagaaccagttcctcaacagcctgaaggtggctgagcactcaccg
ctcatcacggggctcagcggtggcaacaaggagaaccacctgcggctgcgcgaccgctct
ttctccgagacgggcgagcggctcctgcacaagtgcctgggcccggccagtcccacaggc
agccaggtgaactccagccgctacaagacggagctgtgccggcccttcgaggagaacggc
gcgtgcaagtacggcgacaagtgccagtttgcgcacggcatccacgaactgcgcagcctg
agccgccaccccaagtacaagacggagctgtgccgcaccttccacaccattggcttctgc
ccctacgggccccgttgccatttcatccacaacgccgacgagcgccgcgggccgccgctc
aagtccagcaacggctcgtcgccatcgacctgctcctcctcctcgtcttcttcgggcgag
atggagcggccccggctgcagcacagctacagtttcgcgggctttcctagctcggcgggg
ctccgcgacagtccgacatccgtcaccccgccacccatcttcttccctgacgacgtgcct
gactggcccagcagcaaccccttcacctactccagccaggagctggccaacctgttcggc
cccagcttgggtggcgtccccctgccccctgaggccagcaacggggcacccccttccccc
accagcgggccttactacttccgacccatgctggagtcgccccagatgttcgagtccccg
tccagcccgcaggactccctctcggaccaggagggctaccagagcagctccggcagcagc
ctgagcggctccgagtcacccacgctcgacaccacccgtcgactccccatcttcagccgc
ctctccatctctgacgactag
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