Syngnathus scovelli (Gulf pipefish): 125981270
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Entry
125981270 CDS
T08785
Symbol
nkx2.1
Name
(RefSeq) homeobox protein Nkx-2.1
KO
K09342
homeobox protein Nkx-2.1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125981270 (nkx2.1)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
125981270 (nkx2.1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
125981270
NCBI-ProteinID:
XP_049597181
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Position
14:complement(6634275..6638858)
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AA seq
423 aa
AA seq
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MSMSPKHTTPFSVSDILSPLEESYKKAAAAAAAMEAAGVGAVVAANNSGNNLGGYRQLQG
SQAAMQQQQQQQQQQQQQPHHHHHHHHHHLGPNAGGGGGAGGGAGGTVSYHMSAAGVPQL
SHAAAVSAVGGYCNGSVAGDLAPYQDGVRAAAATGWYPANPAADPRFSTISRFMHGSSSA
MSMGAMGGLGSLAEAHAKGMHGSLSAAVPRRKRRVLFSQAQVYELERRFKQQKYLSAPER
EHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKVSQQQMHQQEGGSASACQQSQQQQQSPR
RVAVPVLVKDGKPCQGSGPTAGQQQQQHHHHQHHHNHAHNQHPHGHPQQQQQQAANVMLM
SGQQQASSAGHSPELVAAGAPPLSASPPALHGGQVGGLSHLNSPAAEYGSALQCSALLYG
RTW
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagccccaagcatacgacccccttttccgtgtccgacatcctgagtccactg
gaggagagctacaagaaggcggccgccgccgccgccgccatggaagccgccggcgttgga
gcggtggtggcggccaacaacagcggcaacaacttggggggctaccggcagctgcagggg
tcccaggcggccatgcagcaacagcagcagcaacaacagcagcagcaacagcagccccac
catcatcatcatcatcaccatcaccacctggggcccaacgccggtggtggcggcggcgct
ggcggcggagctggcggcaccgtgtcttaccacatgagcgccgccggggtgccacagttg
tcccatgccgccgccgtcagcgcggtgggcggctactgcaacggcagcgtggccggtgac
ctggcgccctaccaggacggagtcagggcggccgccgccaccggatggtacccggccaac
cccgccgctgacccacgcttctctacgatctcccgcttcatgcacggttcgtcgtcggcc
atgagcatgggcgccatgggcgggctgggctccctggcggaggcccacgccaagggcatg
catggctcgctgagcgccgcggtgccgcgccggaagcgccgcgtgctcttctcgcaggcc
caagtgtacgaactggagcgccgcttcaagcagcagaagtacctgtcggcccccgagcgc
gagcacctggccagcatgatccacctgacgcccacccaggtcaaaatctggttccagaac
catcgctacaagatgaagaggcaagccaaggacaaggtgtcgcagcagcagatgcaccag
caggagggcggctcagcgtcggcttgccagcaatcacagcagcagcagcaatcgccccgc
agggtggcggttccggttctggttaaggacggcaagccgtgtcaagggagcgggccgacg
gcggggcagcagcagcaacagcaccaccaccatcaacatcatcacaaccacgctcacaac
cagcacccgcacgggcatccgcaacagcagcagcagcaagccgccaacgtgatgctaatg
tccggccagcagcaggcgagcagcgccggccactctccggagttggtggccgccggtgca
ccgccgctgtctgccagcccgccagcgctgcacggcggccaagtgggcggactgtcgcac
ctcaattcgcccgcagctgagtacggaagcgcgttgcagtgctcggcgctcttgtacggc
aggacgtggtga
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