Syngnathus scovelli (Gulf pipefish): 125981374
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Entry
125981374 CDS
T08785
Symbol
dcps
Name
(RefSeq) m7GpppX diphosphatase isoform X1
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125981374 (dcps)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125981374 (dcps)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
125981374 (dcps)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
125981374 (dcps)
3'-5' decay
Other 3'-5' decay factors
125981374 (dcps)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
Motif
Other DBs
NCBI-GeneID:
125981374
NCBI-ProteinID:
XP_049597388
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All DBs
Position
1:complement(16274453..16276741)
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AA seq
330 aa
AA seq
DB search
MADISTNRESNPEAFDEFTQRTKKTKTNHEDGQGENGRESEKNVLSGFQTTTVLSDSATE
KTIFVHGKLADQNAVVILEKTPIREDDLSEIFDASTLELDMRNDIYSTYRLRSPPHLNEM
KATVVCPATEKHVQKYQRQESFLVEETTDDYQSITLPFIQKQSFSVQWVYNILEKKAESE
RIVFEDPDPKLGFVLLPDFKWDQKQTDNLYLIAITHQRNIKSLRDLTSEHIPLLQNIFQK
GKEAIQQHFSLPGSKLRVYLHYQPSYYHLHVHFTKLGYNAPGCGVERAHLLTDVIQNLQS
DPHYYKTRTLSFPLRADDGLLAQFKEAGKL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatttcaactaaccgtgaaagtaatcccgaagcattcgatgaatttactcaa
agaaccaaaaagacaaaaacaaaccacgaagatggacaaggagagaatggaagggaatcg
gaaaaaaatgtcctgtcaggttttcaaactactaccgtgttgagtgattctgccacggag
aaaaccatcttcgtccacggaaagcttgctgaccagaatgctgtagtcatcctggagaag
actcccatcagagaagatgatctgtctgaaatatttgatgcatccaccctggagttagat
atgaggaatgacatctactccacctaccgtctccggtctccacctcaccttaatgagatg
aaggcgactgtggtgtgtccagccactgagaagcatgtgcagaaataccagcgtcaggag
agcttcttggtggaggagacaacagatgactaccagtccatcactcttcccttcatccaa
aagcagagttttagtgtgcagtgggtatacaacatcctggagaagaaggctgagtctgag
cgcatagtgtttgaagatccagacccaaagcttgggtttgtcctcctcccggatttcaaa
tgggatcaaaaacagactgataatttgtacctgattgccatcactcatcagagaaacatc
aaaagtctgagggatctgacatcagagcacatcccactccttcaaaacattttccagaaa
ggaaaggaggccatccagcagcacttcagccttccaggcagcaagctgagagtctacttg
cactaccagccatcttactaccaccttcatgtccacttcaccaaacttggctacaatgcg
ccgggttgtggtgtggagcgagcccacctcctcacagatgtcatccagaaccttcagtca
gacccacactactacaaaaccagaactctctcgttccccctccgggcagatgatggattg
ctcgctcagtttaaggaagccgggaagttataa
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