Syngnathus scovelli (Gulf pipefish): 125981715
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Entry
125981715 CDS
T08785
Symbol
nectin3b
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
sscv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125981715 (nectin3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125981715 (nectin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125981715 (nectin3b)
04090 CD molecules [BR:
sscv04090
]
125981715 (nectin3b)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
Nectin family
125981715 (nectin3b)
CD molecules [BR:
sscv04090
]
Proteins
125981715 (nectin3b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
V-set
C2-set_2
I-set
Ig_2
TM_ErbB1
Keratin_assoc
Motif
Other DBs
NCBI-GeneID:
125981715
NCBI-ProteinID:
XP_049597551
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All DBs
Position
15:complement(6324257..6337682)
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AA seq
559 aa
AA seq
DB search
MQSFSHQTYLGRHCKIALFHLLFHITGMLASQVVVPPSVSAVLGKNLTLECRVDVATNLT
LTQSSWERRLPSGSVTVAVYNPSYGISISREFIHRLYFRSPSSHDATIVLENVGFADMGL
YTCKVATFPLGNTQASTTVSVLVEPKVYVSAGSTALIDGSNETAVATCIAERARPPAEVS
WESNLFGQSEVQLFDDVNGTTTTQVRYLWQPTRHIQGHTLTCVVRHPALLNDFRVPYQLN
VQFAPDISVVGYDGDWYVGRDNVQMTCEANANPPARHFRWIRLDGEMPEGVEILNSTLLF
LRPLQKNDSGVYRCEVANDINLRSRDVRILIQDPPTMPSIITAPVLSGSSSSSTLVDDKL
HVHLSSPTLEALPESNLGTVVGGAVGGALFLLLLLCLAGVCYLRKQQTLHGDYYAKQCPG
PGDLQKAPGKQHELHVTKVVGGGGSGGSHRRQDHDREEWGGRELKRHCSYDGDEYPSNGY
TRAMREGGHHSNQQNPQQGQTAYCSPQQQPRRPRYTQSPKPTRNGSPYVPNNGYYASAPE
GDYVSHKDGSVISRREWYV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctttttctcaccaaacttaccttggacgccattgcaagatcgcgttgtttcat
cttttgttccatattacagggatgttggccagtcaggtggtggtgccacccagtgtgagt
gccgtgctaggcaagaacctgacgttagagtgccgagtggacgtggccaccaacctcact
cttactcagagctcttgggagcgacgtttgccttcaggctctgtcacggtggccgtctac
aacccgagctacggcatctccatctcccgggagttcatccatcgcttgtatttccgctcg
ccttcatcccacgatgccacgattgttctagagaatgtgggctttgccgatatgggtttg
tacacctgcaaggtggccacattcccgctcgggaacactcaagcctccacgactgtcagt
gtgctggtggagccgaaggtgtacgtgtcggccggctcgacggcgctgatcgacggcagc
aacgagacggcggtggccacttgcattgccgagcgagcccgcccccccgccgaggtctcc
tgggagtccaaccttttcggccagtcggaagtgcagcttttcgacgacgtcaacgggacc
accaccacgcaagtgcgctacctatggcagcccacccgtcacatccagggccacacgctc
acgtgtgttgtccgccacccagctttgctcaacgacttcagggtgccctaccagcttaat
gtgcagtttgctccggatatttccgtggtgggatacgacggagactggtatgtgggtcgg
gacaatgttcaaatgacgtgcgaggccaacgcaaacccaccggctcgtcacttcagatgg
atcaggttggatggtgagatgccagagggcgtcgaaatcctcaacagcaccctgcttttc
ctccgtcctctccagaagaatgactcgggcgtgtacaggtgtgaggtcgccaatgacatc
aacctccgcagtcgggacgttcgcattctcatccaagatcctcccaccatgccttccatc
attaccgctcctgtcctctctggttcctcctcctcctccaccttagtggacgataagctc
cacgttcatctcagctcccctactctcgaagcgctacctgagagtaacctgggcaccgta
gtgggtggggcagtgggcggggccttgttcctcctcctgctgctgtgtctggccggcgtg
tgctacctgcgaaaacaacagactttgcacggggactactacgctaaacagtgcccgggt
cccggcgatctccagaaagcccctggcaagcagcacgagctccacgtcaccaaggtcgtc
ggcggtggcggcagcggcggctcgcaccgccgtcaggaccacgacagagaggagtggggc
ggccgcgagctcaagcgccactgcagctacgatggagatgaatacccgtctaatggctac
acgcgggccatgagggagggtggtcaccacagcaaccagcagaatccccagcagggacaa
acggcgtattgtagtccacagcagcagcccaggaggccccgatacacgcagtctcccaaa
cctacgaggaacggctccccctacgtgccaaacaacggctactacgctagcgccccggag
ggcgattacgtctctcacaaagacggctcggtcatctctcgcagggagtggtacgtttga
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