Syngnathus scovelli (Gulf pipefish): 125981767
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Entry
125981767 CDS
T08785
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125981767
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125981767
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
125981767
NCBI-ProteinID:
XP_049597662
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All DBs
Position
15:complement(6180849..6185413)
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AA seq
973 aa
AA seq
DB search
MNKKMQFPPELIGAIQEGKMELVCSLLKTGDGIIRQLDDSEDRLWREALNLSIRLGSDCI
MDALLQGVKFDFRQIHEALLVAVDTNQPRVVKLLLDRLDQEKGNKMDVRSFSQAIFDHSI
DNSQFAPGVTPLTLACQKDLYDIVTMLTRKGHVIPWPHKISCACLECRNGRQYDLLKFSL
SRINTYRGIASRAYLSITSDDAMLSAFSLSRELRKLSRNEPEFKPQYLSLEELCQEFAVE
LLGMCRNQSEVTTILNSCGDESQEALDEQAFEEGIPNLSRLRLAVNYNQKQFVAHPICQQ
VLSSIWCGNLAGWRGSRTAWKLFVAVGIFFTMPFLCLAYWIAPKSKVGKILKTPVIKFLL
HSASYLWFLITLLGESITMEMYRDTFAARQQNILHSSFHMVWVVGFFWYECKEVWIEGLR
SYFLDWWNCLDVVVLSMYLASFALRVLIMLKGHLCLDTNSSEEECVYFTQTVRDDWRQED
PQLIAEVLFAVTSMMSFTRLAYILPAHESLGTLQISIGKMIDDMMRFMFILMIIGTAFLC
GINNVYVPYVISPRLGRFNETFHFLFWTMFGVANQDYVDMPQFVLAEFVGRILYGIFTLV
IVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPVPFNIIPSPKALF
YILRVIFRRICCCMNCNSAKYPPIASLFDKKGSEDNQVPYRQQVIRALVQRYIESARREF
EETKRKDIGNRITELSKGVLRMHNDLKMVHHHLVDESHRTAADELSKDGSSFLGKYILGA
KNNFRGFNSQLDQKSTSRDVTVHHGEEEEEEEEKIKGPMDEKECCEGEEMSSRLSSHGDL
VKMEEGRCQTEKEQIDANKSDNANEIAPAKHFNIEEEQKILSESPKKRISEDTENMRNTF
EEIELQENKVEAGWMNGRQREPDICRRCDDEGENLESQTKIASPSGSSSSRDTGFGSEEG
EASIDDTDSKTLA
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaaatgcagttccctccagagctcatcggcgccatccaggaagggaaaatg
gagctggtttgcagcctgctcaagacgggcgacggcatcatccgccagctggacgactct
gaagatcgcctttggagggaggccctcaacctgtctatccgcctggggagcgactgcatc
atggacgccctcctccagggggtcaagttcgacttccgtcagattcacgaggcccttctc
gttgccgtggacaccaaccagccgagagtggtcaagctcctgctggaccgcctggatcag
gaaaaaggcaacaagatggacgtgcgctccttctctcaagccatctttgaccactccatt
gacaactcgcagtttgcccccggtgtgaccccgctgaccttggcgtgccagaaagatctt
tacgacatcgtcaccatgctgacccgaaagggtcacgtcatcccgtggccgcacaaaatc
tcctgcgcctgcctggagtgccgcaacgggcgtcagtacgacctactcaagttctccttg
tcccgcatcaacacctaccgcggcatcgccagccgcgcttacctctccatcacgtccgac
gatgccatgctcagcgctttcagcctcagcagagaacttcgcaaactttctcggaatgag
ccagagttcaagcctcagtacctgagcctggaggagctttgtcaagaatttgccgtggag
ttgttgggtatgtgccgcaaccagagcgaggtgaccaccattctcaacagctgtggagac
gagagccaggaggctttggacgagcaggccttcgaggagggcataccaaacttatcaagg
ctacgcttggctgtcaactacaaccagaagcagtttgtcgcccaccccatctgccaacaa
gttctgtcttcaatctggtgtggcaacctggcaggttggagaggtagcaggactgcgtgg
aagctctttgtcgccgtcgggatctttttcacaatgcccttcctctgcctcgcctactgg
atcgcaccaaagtcaaaagtgggaaagatcctaaagactcccgtcatcaagttccttctt
cattccgcttcctatctgtggttcctcatcacattactcggggaatccatcaccatggag
atgtaccgggatacgtttgcggcgaggcagcagaacatcttgcacagctccttccacatg
gtttgggtggtcggtttcttctggtatgagtgcaaggaagtgtggatcgaaggtctgagg
agttacttcctggattggtggaactgcttggacgtggtggtgctcagcatgtacttggcc
tccttcgccttacgtgtgctcatcatgctcaagggtcatttgtgtctcgacacaaacagc
tcggaggaggagtgcgtctacttcacccagacggtgcgtgacgactggcgtcaggaggac
cctcagttgattgcggaggttctgttcgccgtgacgagtatgatgagcttcacaaggctc
gcttacattctcccggcgcacgagtccctaggaacgctccagatctccatcggcaagatg
atcgacgacatgatgagattcatgttcatcctgatgatcatcggaacggccttcctatgc
gggatcaataatgtctacgtcccttatgtcatctcaccgcgtcttggcaggtttaacgag
acgtttcactttcttttctggaccatgttcggtgtggccaaccaggactacgtggacatg
ccgcagtttgtcttggccgaatttgtcggacggattctgtacggaatcttcacgcttgtc
atagtcattgtgttactcaacatgcttattgctatgatcaccaactcctttcagaaaatt
gaggacgatgcagatgtggagtggaagtttgccagatccaagctgtatctcagttacttc
cgagagggcctcaccatgcccgtcccattcaacatcatcccttccccaaaagctttgttt
tacatattaagggtcatctttaggcgcatctgctgctgcatgaactgtaattctgcaaaa
tatccaccaatagcttctttgtttgacaaaaagggctccgaggacaaccaggttccgtac
cgtcagcaggtgatcagagctctggtgcaacgatacatcgaatcggctcggagggagttt
gaggagaccaagaggaaagatatcggtaatcgcatcaccgagctgagcaaaggcgtcttg
aggatgcacaatgacttgaaaatggtccatcaccacttggtcgatgaaagtcaccgtacg
gccgccgacgagctgtcgaaagacggctcgtcattcctcggcaaatacatcttgggcgcc
aaaaataatttcagaggctttaacagccagctggatcagaaaagcacgtcacgtgatgta
acggtgcatcacggagaggaggaggaggaggaggaggagaaaataaaaggcccaatggat
gaaaaggagtgttgcgagggtgaagagatgagctccaggctttcgtcacatggggatttg
gtcaagatggaggaagggcgatgtcaaacggaaaaagagcagatagacgctaacaaaagt
gacaacgcaaatgagatagctccagctaaacatttcaatatagaagaagaacagaagata
ctttctgaaagccccaaaaaaagaatcagtgaagacaccgaaaatatgcgcaatacattt
gaagagatagaattacaagaaaacaaagtggaggccgggtggatgaacgggcgacagcgt
gagccagatatttgcagaagatgtgatgatgagggtgaaaatttagagagccagacaaaa
atagcttcgccatcaggcagcagcagttctcgggacacaggatttggttctgaagaaggc
gaggcttctattgatgacacagacagcaagacgctagcttag
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