Syngnathus scovelli (Gulf pipefish): 125981776
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Entry
125981776 CDS
T08785
Name
(RefSeq) glutamate receptor 1 isoform X4
KO
K05197
glutamate receptor 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04080
Neuroactive ligand-receptor interaction
sscv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125981776
04082 Neuroactive ligand signaling
125981776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125981776
Ion channels [BR:
sscv04040
]
Ligand-gated channels
Glutamate (ionotropic)
125981776
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
125981776
NCBI-ProteinID:
XP_049597673
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Position
15:complement(522662..531521)
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AA seq
1023 aa
AA seq
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MRTPLALALGLALATAAAFPASVSIGGLFPAGSHEQEVFRFAMAQRGADVPKLLPQIDAV
DIGSSFAMTYAFCSQLAKGVHALMGVYDQRTVNTVSSFCASLHVSFVTPSSPTLADSPFV
LRLRPSLREALMSLLDHFGWRRFVYMYGAHEGVLVLKKVLERAAERGWQVTSVNLDSLNE
SGFIQLLADLDFKKEYQVVLDCESERLDAILGLISAQRRNLKNYQYILLNPGFVELNLTE
FHALSPNVTGFQLVNWSHGSALKVQRDWINFDPKEGKTTRRALRYAGALTYDGVGVLAAA
FQSLRRQRIDVARRGNAGECLGNPPAPWGQGIDIQRALQQVRLDGLTGRIQFDERGRRTN
FTLTVMELSRTGPRKVCVSVCVCVCVRVRACKVASARSPRYSGRYVERAERLHKHGPVQA
YPGGVLRAAEPHLRGHHHPGEPKQYSLSVYCTFLGWQCIPALGGFILRSGDKGGGVLCFQ
EAPYMMLKKNHEQLVGNDKYEGYCAELAAEIAKHVGFAYRLELVGDGKYGARDSVSKMWN
GMVGELVYGVRAGRHSNRSCWSYGKRHSCVDLQKADVAVAPLTITLVREQVIDFTKPFMS
LGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWKEEEEE
EEVEEETPPTSSRHAPGPNRRQSPKDQEKESPEHTNHFGIFNSLWFSLGAFMQQGCDISP
RSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQSEIAYGTLDGG
STKEFFRRSKIGVFEKMWSYMRGADPSVFVKNTDEGVSRVRKSKGKYAYLLESSMNEYIE
QRAPCDTIKVGGNLDSKGYGVATPKGSALRIPVNLAVLKLNEQAVLDKLKNKWWYDKGQC
GHKDAGRKDKTSALSLSNVAGIFYILIGGLGVAMMVALLDFCYKSRLESRRMKELIDAAM
LSSSLGGALSLAGGGALGLAGGGALSLAGENGGAVARELARASAPGLVCASKAAGLGLPS
NLT
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaggactccacttgctttggcgctcggcttggcgctcgctaccgccgccgcttttcct
gccagcgtcagcataggaggacttttcccggccgggtcgcacgagcaggaggtgtttcgt
tttgccatggcgcagcgcggcgccgacgttcccaagctgctgcctcagatcgacgccgtc
gacatcggcagcagctttgccatgacctacgctttctgttcgcagttggccaaaggcgtg
cacgcgctgatgggcgtgtacgaccagaggacggtcaacacggtgtcctccttctgcgcc
tcgctccacgtcagcttcgtcacgccgtcatcgccgacgttggccgacagccccttcgtg
ctgcggctgcggccgagcctgcgagaggcgctcatgtcgctgctggaccactttggctgg
cgacgcttcgtctacatgtacggtgcccacgaaggcgtgttggtcctgaagaaggtgctg
gagcgggcggccgagcgaggctggcaggtgacgtcggtcaacttggactcgctaaacgag
tcgggcttcatccagctgctggccgacctggacttcaagaaggagtaccaagtggttctg
gactgcgagtcggagcgcctcgacgccatcctgggcctgatttcggcacagagaagaaac
ctgaagaactatcagtacatcctcctcaacccgggctttgtggagctgaacctgaccgag
ttccacgcgctctcccccaacgtaacgggcttccagctggtcaactggtcccacgggtcg
gcgctgaaggtccagcgggactggattaactttgaccccaaggagggcaaaaccacgcgg
cgcgctctgcggtacgcaggcgcgctaacctacgacggcgtcggcgtattggcggcggcc
tttcagagcctccgacgccagcgcatcgacgtcgctcgccgcgggaatgccggagagtgt
ttggggaacccccccgcgccttgggggcaaggcatcgacatacagagggcgctgcagcag
gtgcgtctagatggtttgacaggtcgcattcaatttgacgagagaggacgtcggaccaac
tttacactcacagtcatggaactgagccgaactggacccaggaaggtgtgtgtgagtgtg
tgtgtgtgtgtgtgtgtgcgtgtgcgtgcgtgcaaagttgcatctgcacgctcaccgcga
tattcaggtaggtatgtggagcgagcagagaggctacataaacacggcccggtacaagcc
taccccggaggagttctacgggctgcagaaccgcacctacgtggtcaccaccatcctggt
gagcccaagcagtacagcctcagcgtctactgcacttttttagggtggcagtgtatccca
gctttaggcggcttcatcctcagatcaggtgacaaagggggcggggtcttatgcttccag
gaagcgccttacatgatgctaaagaagaaccacgagcagctggtgggaaacgacaagtac
gaaggttactgcgccgagctggcggccgagatcgccaagcacgtgggcttcgcctaccgg
ctggagctcgtgggcgacggcaagtacggcgcccgagattccgtcagcaaaatgtggaac
ggcatggtgggggagctggtctacggggtgagggcagggcgccactcaaatcggagctgt
tggtcgtatgggaaacgtcattcctgcgttgacttgcagaaggcggacgtggcggtggcg
ccgctgaccatcacgctggtgcgcgagcaggtgatcgacttcaccaaacctttcatgtcg
ctcggcatctccatcatgatcaagaagcccaccaagtccaagcccggcgtcttctccttc
ttggacccgctggcctacgagatctggatgtgcatcgtcttcgcctacatcggcgtcagc
gtggtgctcttcctggtgagccgcttcagtccgtacgagtggaaggaagaggaggaggag
gaggaagttgaggaggaaactccgcccacctcttccagacacgccccaggaccaaacagg
cggcagtccccgaaagaccaagagaaagagagtccggaacacaccaaccactttggcatc
ttcaactcgctctggttctccttgggagcctttatgcagcaaggatgcgacatctcgccc
aggtcgttgtcgggtcgcatcgtgggcggcgtgtggtggttcttcacgctgatcatcatc
tcctcgtacacggccaacctggccgccttcctgacggtcgagcgcatggtgtcgcccatc
gagagcgccgaagacctcgccaagcagagcgagatcgcctacggcactctggacggcgga
tccaccaaggaattcttcaggaggtccaagatcggcgtgtttgagaagatgtggtcgtac
atgcgcggcgccgacccgtccgtcttcgtcaagaacacggacgagggcgtgagccgcgtg
cgcaagtccaagggcaagtacgcctacttgctggagtcgtccatgaacgagtacatcgag
cagcgcgcgccttgcgacaccatcaaagtgggcggcaacctggattctaaaggctacggc
gtggccacgcccaaaggatcagccctcagaattccggtgaacctggccgtgctcaagctc
aatgagcaggccgtgttagacaagttgaagaacaagtggtggtacgacaaaggtcaatgt
ggacacaaggacgccggccggaaggacaagacgagcgcgctgagcctgagcaacgtggcg
ggcatcttctacatcctgatcggtggcctgggcgtggccatgatggtagccctgctagac
ttctgctacaaatcgcggctagagtcgcgcaggatgaaggagctgatcgacgccgccatg
ctgagcagcagcttgggcggggccctgagcctggcagggggcggagccctgggcctagca
gggggcggggccctgagcctggcaggagagaacggcggcgcggtggcgcgggagttggcc
cgggccagcgcgcccggcttggtgtgcgcgagcaaagccgccggactggggctgccctcc
aacctcacgtga
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