Syngnathus scovelli (Gulf pipefish): 125981882
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Entry
125981882 CDS
T08785
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K11825
AP-2 complex subunit beta-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125981882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125981882
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
125981882
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Arm
PDS5
HEAT_EZ
Cnd3
NELF-A_N
Arm_2
API5
FANCI_S3
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
125981882
NCBI-ProteinID:
XP_049597897
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Position
15:2486821..2493778
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AA seq
959 aa
AA seq
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MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNTLLKKLSPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPSAFVEGSHGIHRKHLPVQHSSI
DTGESPLSGGPAASAAASSVDQPHVIPSQGDLLGDLLNLDLGPPVNVPQVSSMQMGAVDL
LGGGLDSLLGGDLGGGVGGSPAVGQNFIPSSVPSTFAPSPTPAPPAVTGSGLNDLFELST
GMAIASGGHVAPKAVWLPAVKAKGLEISGTFSRRQGHMYMDMTFTNKALQHMTDFAIQFN
KNSFGMIPTSPLPIHTPLMPSQGMDVSLPINTIGPVMKMDPLNNLQVAVKNNIDVFYYSV
LIPLNIFFVEDGKMERQVFLATWKDIPNENELQYQIKECHLNADTVSGKLQNNNIYTIAK
RNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYVYQTYDAVLKN
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgacggactccaagtatttcacgacaaacaaaaaaggggagatttttgagctgaaggcc
gagctgaacaacgaaaagaaggagaagcgaaaggaggctgtcaagaaggtcatcgccgcc
atgaccgtgggcaaggatgtcagctctttgttcccggatgtggtcaactgcatgcagacg
gacaacctggagctgaagaagttggtgtacctctacttgatgaactacgccaagagccag
cccgacatggccatcatggctgtcaacagcttcgtcaaggactgcgaggaccccaacccc
ctcatccgggccctggcagtccgcaccatgggctgcatccgagtggacaagatcaccgag
tacctttgcgagccgctgaggaagtgcctgaaggacgaggacccgtacgtgaggaaaacg
gcggcggtgtgcgtggccaagcttcacgacatcaacgcccagatggtggaggatcagggc
ttcttggactcgctgagggatctcatcgccgactctaatcccatggttgtcgccaacgcg
gtggccgcactgtctgagatcagcgagtctcaccccaacagcaacctgctggacctcaac
ccccagaacatcaacaagctgctgacggccctcaacgagtgcaccgagtggggccagatc
ttcatcctggactgcctgtccaactacaaccccaaggacgagcgagaggcgcagagtatt
tgcgagcgcgtcactccacggctgtcccacgccaactccgcggtggtcctgtctgccgtc
aaggtactgatgaagttcctggagctgctgccaaaagactcggactactacaacacgctg
ctgaagaagctttcgccgcccctcgtcaccttgctgtccggcgagcccgaggttcagtac
gtggctctgaggaacatcaacctcatcgtccagaaaaggcctgagatcctcaagcaggaa
atcaaagtcttctttgtcaaatacaacgaccccatttacgtgaagctggagaaactggat
atcatgatccgtttggcttctcaggccaacatcgcccaggtgctggccgagttgaaggag
tacgccaccgaggtggacgtcgactttgtgcgcaaggccgtgcgcgccattggccgctgt
gccatcaaagtggagcaatcggcagagcgctgcgtgagcaccctgctggacctcatccag
accaaagtcaactacgtggtgcaggaggccatcgtggtcataagggacattttccgcaag
taccccaacaagtacgagagcatcatcgccaccctgtgcgagaatctggactctctggac
gagccggacgcccgcgccgccatgatctggatcgtgggcgagtacgccgagaggatcgac
aacgccgacgagctgctggaaagcttcctggagggcttccacgacgagagcactcaggtg
cagctcaccctgctgaccgccatcgtcaagctcttcctgaaaaagccgtccgagactcaa
gagttggtgcagcaggtcctcagcctggccactcaggactccgacaacccggacctacgc
gacagaggctacatctactggcgcctgctgtccacggacccggtgacggccaaggaggtg
gtgctgtcggagaagcccctcatctccgaggagactgatctgatcgagcccacgctgctg
gacgagctcatctgccacatcggctctctggcgtccgtctatcacaaaccgcccagcgcc
ttcgtggaaggcagccacgggatccaccgcaaacaccttccggtccagcacagcagcatc
gacacgggcgagagtccgctgagcggcgggcccgcggcgtcggcggcggcatcctctgtg
gatcaaccgcacgtcatcccgagccagggcgacctgctgggtgacctgctcaacctggac
cttggccctccggtcaacgtgccccaggtttcctccatgcagatgggtgccgtggacctc
ctgggtggcggactcgacagcttgctgggaggagacctgggcggaggtgttgggggaagt
ccagctgtgggtcagaacttcatcccgtcgtccgtcccgagcacttttgcgccgtcgccc
actccagcgcctccggccgtcaccggcagcggcctcaacgacttgtttgagctctccacg
ggcatggccatcgcatccggaggccacgtggccccgaaagccgtgtggctgcccgcggtt
aaagccaagggactggagatttccggaaccttctctcgccgccagggccacatgtacatg
gacatgaccttcaccaacaaggccctgcagcacatgaccgactttgccatccagtttaac
aaaaacagcttcgggatgatccccaccagcccgctgcccattcacactccgctgatgccc
agccagggcatggacgtctctttgcccatcaacaccatcgggccggtgatgaagatggac
ccgctgaacaatctccaggtggctgtgaagaacaacattgatgtcttctactacagcgtc
ctcatccctctcaacatattctttgtggaagatggaaaaatggagcgccaggtgttcctt
gccacctggaaagatatccccaatgaaaatgagctgcagtaccagataaaggagtgccac
ctgaacgcggacacggtgtcgggcaagctgcagaacaacaacatctacaccatcgccaag
cgtaacgtggaaggtcaggacatgctctaccagtccctgaaactcaccaacggaatctgg
atcctggccgaactgcgcatccagccaggcaaccccaactacacgctgtccctcaagtgt
cgggcccccgaggtgtctcagtacgtgtaccagacttacgacgccgtgctgaagaactga
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