Syngnathus scovelli (Gulf pipefish): 125981886
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Entry
125981886 CDS
T08785
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00061
Fatty acid biosynthesis
sscv00071
Fatty acid degradation
sscv01100
Metabolic pathways
sscv01212
Fatty acid metabolism
sscv03320
PPAR signaling pathway
sscv04146
Peroxisome
sscv04216
Ferroptosis
sscv04920
Adipocytokine signaling pathway
Module
sscv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125981886
00071 Fatty acid degradation
125981886
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125981886
09143 Cell growth and death
04216 Ferroptosis
125981886
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125981886
03320 PPAR signaling pathway
125981886
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sscv01004
]
125981886
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125981886
Enzymes [BR:
sscv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125981886
Lipid biosynthesis proteins [BR:
sscv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125981886
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of breast milk
125981886
Exosomal proteins of breast cancer cells
125981886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125981886
NCBI-ProteinID:
XP_049597903
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All DBs
Position
15:2337640..2346768
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AA seq
722 aa
AA seq
DB search
MLAFVLVSGSLWILLELSSTLMEKMQGQEMLSGLRVPDMAELGHFFSSLPTSTLLGIGAL
AAVLAYWLATRPRPVKPPCNLLHQSEEVPRQDGGRRSMMGDASQLLTHYHDDARTMYEVF
QRGLHISGDGPCLGSRLPNQPYKWLSYKEVTSRAEHLGSGLLHQGCKASPDQFIGVFAQN
RPEWIISELACYTYSMVVVPLYDTLGPDAIRFIINTADISTVICDKVDKAQVLLANVERA
ETPALRRIILMDALDAVLVERGRGCGVHVQAMLEVEALGRDNHRKPLPPSPQDLSIVCFT
SGTTGNPKGVMLTHGNVVADFSGFLKVTDKVIFPNQDDCLISFLPLAHMFERLIESVVYC
HGGRIGFYQGDIRLLPDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPLKRWLLNFAAQR
KGAEVSSGIIRSDSIWDKIFFSKIQASLGGRLRMIITGAAPTSPTVLGFLRAALGCQVYE
AYGQTECTAGCTFTTPGDWTPGHVGAPLPCNLIKLVDVPEKNYFTAKGEGEVCVKGPNVF
KGYLKDPERTAETLDPDGWLHTGDIGKWLPNGTLKIVDRKKHIFKLAQGEYISPEKIENI
YIRSEPVAQLYVHGDSLQSCLVGIVVPDPEVMPTWAKKKGILGTYKDLCKNTELKKAILE
DLVRLGKAGSLHSFEQVKNIYIHSEMFSIQNGLLTPTLKAKRPELREFFKEKIEQLYSTI
SM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccttcgtgctggtgtccggctcgctgtggatcctcttggagctgagttcgacg
ctgatggagaagatgcagggccaggagatgctaagtggtctgagggtgccggacatggcg
gagctgggccacttcttcagctcgctgcccacatccacgctgttgggaatcggcgctctc
gccgctgtgctggcctactggctggccaccaggcctcgccccgtcaaaccgccgtgtaat
ctcttgcaccagtccgaggaggtgccgcgccaagatggcggtcgtaggtccatgatgggt
gacgcttcccagctgctgactcattaccacgacgacgcgaggacaatgtacgaggtcttc
cagcgaggccttcatatatcaggcgacgggccttgcctgggctctcgactccccaaccag
ccttacaaatggctgtcctacaaagaggtcacgtcccgggccgagcatctgggatcgggc
ctgctacaccagggatgcaaggccagtccagaccagttcatcggggtctttgctcagaac
cggcctgagtggatcatctcggagcttgcgtgctacacgtactccatggtggtggtgccc
ctttatgacacgctgggtcccgacgccatacgtttcatcatcaacacggccgacatctcg
acggttatctgtgacaaggtggacaaagctcaagtgctgctagccaacgtggagcgcgcg
gaaacgccggccttgcgccgcatcattctcatggatgccctggacgccgtcctggttgag
cgcggacgcggttgcggtgtgcacgtgcaagccatgctagaagtggaggcgctgggcaga
gataaccatcgaaaacctttaccgccctcaccgcaggacctttctattgtgtgcttcacc
agtggaacaacaggaaacccgaagggggtgatgctcactcacgggaacgtggtggccgat
ttctctggctttctcaaagtgacagacaaagtgatttttcccaaccaggacgattgcctc
atttccttcctaccactggctcacatgttcgagaggctcatcgagtcggtggtctactgc
cacggggggcgcattggattctaccaaggcgacatccgcttgctgcctgatgatatgaag
gccctgcggcccaccattttccccgtggtgccccgcctgctcaaccgcatgtacgacaag
atcttcagccaggccaacaccccgttgaagcgctggcttctcaactttgccgcccagaga
aaaggcgccgaagtcagcagcggcatcattcggagtgacagtatttgggacaagattttc
ttcagtaagattcaggccagcctgggcggcagattgaggatgatcataaccggggcagct
cccacatcgcccactgtgttggggttcctcagggcagctttaggatgccaggtttacgag
gcgtacgggcagacggagtgcacggctggttgcaccttcaccacgccgggggactggacg
ccaggtcacgtcggcgctccgctgccttgcaacctcatcaagctggtggatgttccggag
aagaactactttaccgccaaaggagagggtgaggtttgcgtgaagggaccaaatgtgttc
aagggctacctcaaagaccccgagcggaccgccgagacactggacccggacggctggctc
cacaccggcgacatcggcaaatggctgcccaacggcaccctgaagatcgtggacaggaag
aagcacatcttcaaactggcccagggcgagtacatctctcccgagaagatcgagaacatc
tatatccggagcgaacccgtggcgcagctttacgtgcacggagacagcctccagtcctgc
ctggtggggattgtggtgcccgacccggaagtcatgcccacgtgggccaagaagaaaggc
atcttaggcacctacaaggacctgtgtaaaaacacagaacttaagaaggccatccttgag
gatctggtgcgtctgggcaaggccggctctctgcactcttttgagcaggtgaagaacatc
tacatccacagcgagatgttctccatccagaacggtctgctgacgcccacgctaaaggcc
aagcggcccgagctgcgggagttcttcaaagagaagatcgagcagctctacagcaccatc
tccatgtga
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