Syngnathus scovelli (Gulf pipefish): 125981892
Help
Entry
125981892 CDS
T08785
Name
(RefSeq) organic cation/carnitine transporter 2-like isoform X1
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125981892
Transporters [BR:
sscv02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
125981892
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
125981892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
125981892
NCBI-ProteinID:
XP_049597908
LinkDB
All DBs
Position
15:2480141..2486937
Genome browser
AA seq
579 aa
AA seq
DB search
MLTTQEPTQSVRVALVSLERTSPKSESPRRMESRMDYEGATAFLGDWGPFQCGLALLLCI
TMIPNGYASLVLVFAGDTPAHRCLVPAVNLTEEWRDASIPLYEDGRPAECSRYQLEALRA
YSEAGWLPSHVNLSAVPREGCLDGWEYDRSIYRSTIVTEWDLVCGQGWKKPLTFSLYYFG
CLVGSFLSGQFSDRFGRKKVLFVTLASQTLSAFLQVFMPSWTAFCVLQFLAGMSAVSNYL
AAFVLGAELLSPRLRLFFTTAASNIFFALGYVLLPLHAYFLRDWRTLLLGITTPGFLLLT
LWWAIPESPRWLLSQGRIAEAEAIVRLVAKRSKMEAPAKIFTTLQKEGDSEMKKYNICDM
LRSPNVRWMSVLLWFVWNTIAMGYLTLSLNTSNLHGNAYLNCFLSGAVEIPAYLLTWLMF
RRCPRRLTLAACLASSGFFLLVIQLVPADTHWLAMTLEMLGKFSLTAAFAHIYAYTAELY
PTVLRNMGMGSCSMASRIGSILAPYIIYLRSYWVSLPYILMGVLIIAAALLSLLLPETYE
IPLPETIAETQPFPGCCRKEVYKPTSTKEESQRQSVDVQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccacgcaggagccgacgcagagcgtgagggtggcgctggtttcacttgagcgg
accagtccaaaatcagaatcgccacgcaggatggagagcaggatggactacgaaggcgcc
acggcgttcctaggggactgggggcctttccaatgtggcctggccctgctcctctgcatc
accatgatccccaacggctacgctagtttggtgctggtttttgcgggcgacacgccggcc
caccgctgcttggttccggcggtcaacctgacggaggagtggcgtgacgccagcatcccc
ctgtatgaggacggccgacccgccgagtgctcccgctaccagttggaggctctgcgggct
tactcggaggcgggctggctgccctcccacgtcaacctgagcgccgtgccccgagagggc
tgcctggacggttgggagtacgaccgcagcatctaccgctccaccatcgtgactgagtgg
gacttggtgtgcggacagggatggaagaagccgctgacgttttcgctctactatttcggc
tgtctggtgggatccttcttgtctggacagttctctgacaggtttggcaggaagaaggta
ctgtttgtcaccctggcgagccagaccctgagcgcttttctgcaggtcttcatgccctcc
tggacagctttctgcgtcctccagttcctcgccggcatgtccgccgtctccaactacctg
gctgcttttgttcttggagccgagctgctcagtcctcgattgcggctcttcttcaccacg
gcggcctcgaacatattcttcgccttgggctacgtgctgctaccgcttcacgcttacttc
ctgcgagactggaggaccttgctgctgggcatcaccacgcccgggttcctccttttaact
ctctggtgggccatccccgaatcgcctcgctggttgctatctcaaggaaggatcgccgag
gccgaggctatcgtccgacttgtcgccaagaggagcaaaatggaggcgccggccaaaatc
ttcaccactttgcagaaagaaggtgactcggagatgaagaagtacaacatctgcgacatg
ctgcgctctcctaacgtccgctggatgtctgttctcctgtggtttgtctggaacaccatc
gccatgggctacctgacgctgtcgctcaacacgtccaacctgcacggcaacgcctacctc
aactgtttcctgtcgggggccgtggagatccccgcctacctcctcacctggctcatgttc
cgccgctgtccgcgtcgactcaccttagccgcttgtctcgcctcttcgggattcttcctc
ctggtcatccagctggttccggcggatacgcactggctggcgatgactctggagatgttg
ggcaagttcagcttgacggcagcgttcgcccacatctacgcttacacggcggagctctac
ccaaccgtgctgaggaacatgggcatgggctcctgctccatggcctccaggataggcagc
atcctcgcaccctacatcatctacctgagaagctattgggtgtcgctgccatacatcctg
atgggcgtcctgatcatagcggcggcgttactcagcctgctgctccccgagacctacgaa
atacccttgccggaaaccatcgctgaaacgcagccctttcccgggtgctgccgaaaggaa
gtctacaaacccacaagcaccaaagaagagagccaaaggcagtccgtggatgtccagtga
DBGET
integrated database retrieval system
