Syngnathus scovelli (Gulf pipefish): 125981908 Help Entry 125981908         CDS       T08785                                  Name (RefSeq) roundabout homolog 1 isoform X1   KO K06753   roundabout, axon guidance receptor 1 Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:sscv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     125981908  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sscv04515]     125981908 Cell adhesion molecules [BR:sscv04515]  Immunoglobulin superfamily   ROBO family    125981908 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  I-set Ig_3 ig Ig_2 fn3 V-set C2-set_2 FN3_DSCAM-DSCAML_C Pur_ac_phosph_N C2-set_3 Ig_5 Unc5_NetrinR_N Ig_PDGFR_d4 Fn3_Dep-1_3rd Ig_J_second Fn3_SaeA_3rd Motif Other DBs NCBI-GeneID:  125981908 NCBI-ProteinID:  XP_049597929 LinkDB All DBs Position 15:complement(8300575..8350794) Genome browser AA seq 1560 aa AA seqDB search MLALATTFILISMLGVERVGCGSAVDILSDKYRRNRDVITPKPEMQPAADHDSSYGYKGS RLRQEDSPPRIVEHPSDLIVSKGEPATLNCKAEGRPPPTVEWYKDGERVETDRDNPRSHR MLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAVSHNASLEVAILRDDFRQNPVDV MVAVGEPAVLECQPPRGHPEPTISWRKNGLNIDDREERITIRSGKLMITNSRKSDAGKYI CVGTNMVGERESEIAELTVLERPTFLKRPSSAVVLADGSVEFHCAAQGDPVPTVRWRKDD SELPKGRYEILEDHTLIVRQVTSSDEGSYTCVVENMVGKSETSAMLTVHVRPAFALRPRN QVAAIGRTVTFQCEATGNPQPAIFWQREGSESLLFSAPQPFSRVSVSQMGSLTITDVQQS DGGLYSCQALNIAGSVITKALLEVTDSGSELPPPVIRQGPVNQTVPVDSTAVLSCHTAGM PPPSVHWKKDGAVLSPLDTRLSIAESGSLEIRYTKLGDTGFYTCVASSPNGEASWTAYLQ VEEFGVIVQTSGPSGPAMLPGAPTKPEITDVSPTSVTLSWKASPNGGATPTSYLIEAFSH TLGSRWVTLAEHVQMQTFVLKNLKPGTVYLFMIRAVNAYGLSDPSTISDSIRTLDSTSTA EGTDPSHIQRELGDVVIHLNTPTVVSSSAVRVNWMVEQHSVYIQGYKLLYRPSAEHGQPE GQWTVLDVRAPHKDGVLIGQLKKGAIYEFKVRPFFDEFQGADSEVKVIRTLEEAPRRAPQ DVTVTKSDTNGTAILVSWKAPPVPEEAQVIQEYKIWCLGNESRYHVNQSVDSYTFSVLVP GLAPGIRYSVEVAASNGAGPGVKSKVMFFQFDSAGQMMDLSEEKDTLSHISDVVKQPAFI AGIGATCWFVLMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGESVCSAGR PGLLGMGEPLNQLWLPDNWPNACTNHKDCSINCCNNGNGTSDSNMTTYSRPADCIANYGK HPDNTHGGQLGSETTFYTDVNLSNKLNEIKTFNNSNLCYASPGGESSDGYEPIPYATTQL IQANIKNKTHTLESMNMPCWNQPPNPPPLPKEMATQMQYNIIEQNVRNKDHLEGNEGLVH HKSSPYNHNQDHSMGGSHHSSDRGSNSTSGSQNQKKGPRAMKTPKHTAVSWGDALSPPHA IAWNGDEYSLPMEKSYDPEKRTEGCPIPPIRGAASSPPDMSNSCHTATHPHGIMSNGVHD GNNHLSSNPLYMESDEQDDDAEDEITLTENHYHLHKNQQHKQKLPHNSPHKLLFHRLEQT PASSTGELDRSVTGSMVNSWGSASEENLSSGRSSIVSTSEGSFFTDGDFSQPEGVRMCRY PEESGQRHQRPSSPMSTDSNMSPAIMQKRPRRFKQNQCVQPSYHPKDVFNDDSFMPLNFP SQMSHSDSRVRGATLPRMGSGETRGRRGSTGTHRVREAPFEEGESQVIDKIQPSGNEGGK SKQHSECGDILLYNRTALPSGPAENEPDDPNASSFILCEDSRIKHRGQMESPVVDEFLRS NT seq 4683 nt NT seq  +upstreamnt  +downstreamnt atgctggcacttgccaccacattcattctcatcagcatgcttggtgtcgagcgagtgggg tgcggcagtgctgtggacattttgtcagataaatacagacgaaaccgtgacgtaatcacc ccaaaacctgaaatgcaacctgcagcagaccacgacagcagctatggatacaaagggtct cgtcttcgccaagaggactcccctccccgcattgttgagcacccctctgacctgattgtg tccaaaggggaaccagccactctcaactgtaaagcagaaggccgtccgccacctacagtg gagtggtacaaagatggggaacgtgtggagacggatcgggacaaccctcgctcgcaccgc atgctcttgccgagcggctcactcttcttcttacgtattgtccacggacggaggagcaag cctgacgacggcagctacgtctgcgtggcccgcaactatctgggccaggcagtcagtcac aatgcatcgctggaagtagctattctacgtgatgacttcagacagaacccagtcgacgtc atggttgcagtgggtgagcctgcagtgctggagtgccagccaccccgtggacatcccgag cccactatctcgtggaggaaaaatggattgaacatagacgacagagaggaacgaattaca atccgcagtggcaagctgatgatcaccaacagcaggaagagcgacgcaggaaaatacatt tgtgttggaaccaacatggttggggagcgtgagagtgaaatcgccgaactcactgtgctt gagcgtccaacgttcctcaagcggcccagcagtgcggtggtgctggcagacgggagtgtg gagttccactgtgcggctcaaggtgatcctgttccgacggtccgctggaggaaagatgat tcggagctacctaagggcagatatgaaatcctagaagaccacactttgattgttcgccaa gtgacctcttcagatgagggttcctatacatgtgtggtggagaacatggttggcaagtct gaaacatctgctatgcttactgttcacgtgagaccagcattcgccttacgccccagaaac caagtggcggcaataggaaggactgtcacattccagtgtgaggccacgggtaacccacag cccgctatcttctggcagagggagggcagtgagagtcttttgttctcagcaccgcagccc ttcagccgtgtgtcagtctcccagatgggcagtttgaccatcaccgatgttcaacaatct gatggcggcctgtacagctgtcaggctctcaatattgctggcagcgttattaccaaagca ctgttggaggttaccgattctggctcagaattgcctccccctgtaattagacagggcccg gtcaatcagacggttcctgtggacagcacagcagtgttgagttgccatacagctggcatg ccacctccgtcggtacactggaagaaggacggtgccgtgctgtcaccactggacacacgt ttgtccatagcagaaagcggctcacttgagattcgctacacaaagcttggagataccggc ttctatacttgtgtggcttctagtcccaatggagaggcctcctggacagcatatttacaa gtagaggagtttggagtcattgtccagaccagtggaccttcaggccccgccatgctgccc ggtgccccaacgaaaccagaaattactgacgttagccccacttctgtcactctttcatgg aaagccagccccaatggtggtgcaacgcctacatcttacctaatagaggcattcagtcat actttaggcagcagatgggtgaccttagctgagcatgtgcagatgcagacttttgtcctg aagaacctgaaacctggcactgtttacctttttatgatcagagctgtcaacgcttacggc ctcagcgaccccagtaccatttcagattcaatccggacgctcgacagcacttctacagct gagggaacagacccaagtcacatccagagggagttgggggatgtggtgatccacctaaac actcccacggttgtgtcgtcctctgcggtccgggtaaactggatggttgagcagcactct gtgtacattcaaggctacaagctgttgtacaggccctcagctgagcacggtcaacctgag ggccagtggactgtcctggatgtacgtgccccacataaggacggagtgttgatcggtcag ctcaagaaaggcgccatctatgagttcaaagtgcggcccttttttgacgaattccaggga gccgacagcgaggtgaaggtgatcagaacgttggaagaagcaccaagacgagcacctcag gatgttactgtaacaaagagcgataccaatggtactgcaatcctcgtatcatggaaagca cctccagtccccgaggaggcacaagtcattcaggagtacaagatctggtgcctgggtaat gagagtcgctatcacgtgaaccaatctgtcgacagctacaccttctctgtactggttccc ggtttggcaccggggattcgctacagtgtagaggtcgcggcaagcaatggtgccggacct ggggtcaagagcaaggtcatgttctttcagtttgactctgctggtcagatgatggatctg agtgaggaaaaggacacattgtcacacatttcagacgtggtgaagcaaccagcatttatt gcaggcattggcgccacctgctggttcgttcttatgattttcagtgtgtggctgtaccgt caccgcaagaagagaagtggcctcagcagcacgtacaccggcatccgcaaggtgccatca ttcaccttcacaccaacagttgcatatcaaagaggagaatctgtgtgcagcgctggcagg cccggccttctcggcatgggtgaacctctgaaccagttgtggctgccggataattggccg aatgcatgcaccaatcataaggactgcagcatcaactgctgcaataatggtaatggcacc agtgacagtaacatgacaacgtacagtcgaccagccgattgcatcgccaactatggaaag cacccagacaacacacacgggggacagcttggctcagagacaactttttatacggatgtc aacctcagcaacaagctcaatgaaatcaagacattcaacaattccaacctgtgctatgca agtccaggaggagaatcctcagatggctatgaaccgatcccctatgctaccacccaactt attcaggccaatattaaaaacaagactcatacattggagtctatgaacatgccctgctgg aatcagccaccaaatcctcctccactaccaaaagagatggccacacaaatgcaatacaac atcatagagcaaaacgttcgaaataaagatcatctagaaggaaatgaaggcttagtacat cacaaaagcagcccctacaaccataaccaagatcacagtatgggaggctcgcatcacagc tcagacaggggtagcaacagcacctcaggaagtcaaaaccaaaagaaaggacctcgggcc atgaagactccaaaacatactgcggttagctggggagatgctctttctcctcctcatgct attgcctggaacggtgatgagtacagtctccccatggagaagagctatgatccagagaaa agaacagaaggctgcccaattccaccaattagaggggcagcatcatctccccctgacatg tctaacagttgccatactgccacacatccacacggaatcatgagcaatggtgtgcatgat ggaaacaatcatctcagctccaaccctctgtacatggaaagtgatgaacaagatgacgac gcggaagacgagataacgcttaccgaaaaccactaccatctgcacaaaaaccaacagcac aaacaaaagttgcctcataactccccgcacaaactgcttttccacaggctggaacagacc ccagcctccagcacaggggagctggatagatcggtcacagggtccatggtaaacagctgg ggctctgcatctgaggagaacttatcatcaggcaggtccagcattgtcagcacctcagaa ggatctttcttcacggatggagatttcagccagccagaaggcgtgcgtatgtgcagatac ccagaggagtcagggcaacgacatcagcggcccagcagtcccatgtcaacagacagcaac atgagtcctgcaataatgcagaaaaggcccagaaggtttaagcagaaccaatgtgtgcaa ccaagctaccatcccaaagatgtcttcaatgacgattcgttcatgcctctgaatttcccc agtcaaatgtcccatagcgactcgagagtaaggggggccaccttaccccggatgggatct ggagaaacccgaggccgaagaggcagcaccgggactcaccgggtcagagaggctccattt gaggagggagagagccaggtcattgacaagattcaaccaagcggaaacgaaggtggcaaa agcaagcaacactcagaatgtggggacattcttctgtacaatcgtaccgctttaccatca ggtccagctgaaaatgagcctgatgaccccaatgcatccagctttatactttgtgaagat tcgaggatcaaacacagaggacagatggagtctccggtagtagatgagttcctgagaagc tga

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